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ProteomicsPT-modified B12 probe and Non-PT-modified B34 probe pull-down with Salmonella enterica serovar Cerro 87 cell lysate
To capture proteins that exhibit differential binding with PT- and non-PT-modified DNA in vivo, we performed pull-down assays using biotinylated DNA probes and the cell lysate of S. enterica serovar Cerro 87 that contains the dndBCDE-dndFGH module. For these experiments, we used two 30 bp DNA probes...
ORGANISM(S): Salmonella enterica subsp. enterica serovar Cerro 
2022-02-26 | PXD031869 | Pride
Salmonella，q exactive Phosphorothioation modification 
UnknownRapid-flow expulsion maneuver in subglottic secretion clearance to prevent ventilator-associated pneumonia: a randomized controlled study.
Not available
S-EPMC8222955 | biostudies-literature
GenomicsGlobal analysis of in vivo EGR1-binding sites in erythroleukemia cell K562 using chromatin immunoprecipitation and massively parallel sequencing
Early growth response gene 1 (EGR1) has been implicated in megakaryocyte differentiation induced by PMA (phorbol 12-myristate 13-acetate). The identification of direct EGR1 target genes in global scale is critical for our understanding of how EGR1 contributes to this process. In this study, we provi...
ORGANISM(S): Homo sapiens 
2010-09-08 | E-GEOD-21665 | biostudies-arrayexpress
TranscriptomicsDLD1 Diploid vs Tetraploid
Tetraploidisation has been implicated in tumorigenesis and in aneuploidy which is frequently observed in most human cancers. In this study we aim to reveal differences in gene expression profile of p53 defective isogenic diploid and tetraploid cell populations. Isogenic DLD1 populations were obtaine...
ORGANISM(S): Homo sapiens 
2014-04-22 | E-MTAB-1789 | biostudies-arrayexpress
UnknownAldolase A accelerates hepatocarcinogenesis by refactoring c-Jun transcription.
Not available
S-EPMC12284681 | biostudies-literature
MetabolomicsUPLC-QTOF-MS-Based Plasma Lipidomic Profiling Reveals Biomarkers for Inflammatory Bowel Disease Diagnosis
Identification of new biomarkers may help in the early diagnosis of inflammatory bowel disease (IBD). In this study, ultrahigh-performance liquid chromatography equipped with quadrupole time-of-flight mass spectrometry (UPLC-QTOF-MS) was used to analyze the untargeted lipidomics and compare plasma l...
2021-10-18 | MTBLS1183 | MetaboLights
UnknownVitamin C deficiency induces hypoglycemia and cognitive disorder through S-nitrosylation-mediated activation of glycogen synthase kinase 3β.
Not available
S-EPMC9399387 | biostudies-literature
UnknownDevelopment and validation of tumor-to-blood based nomograms for preoperative prediction of lymph node metastasis in lung cancer.
Not available
S-EPMC8327690 | biostudies-literature
UnknownWIF1, a Wnt pathway inhibitor, regulates SKP2 and c-myc expression leading to G1 arrest and growth inhibition of human invasive urinary bladder cancer cells.
Not available
S-EPMC2768341 | biostudies-literature
ProteomicsNative MS and intact-protein MS datasets for NreB and NreB_PAS supporting the study “A labile sulfur ligand in a three-cysteine-coordinated [2Fe-2S] cluster mediates sulfide sensing in NreB”
This ProteomeXchange dataset contains native mass spectrometry and intact-protein mass spectrometry data generated in support of the manuscript “A labile sulfur ligand in a three-cysteine-coordinated [2Fe-2S] cluster mediates sulfide sensing in NreB”. The dataset includes intact-protein MS measureme...
ORGANISM(S): Bacillus licheniformis DSM 13 = ATCC 14580 
2026-04-15 | PXD076861 | Pride
Nreb_pas Gsh Nreb Fe-s cluster Nahs Native ms Sulfide sensing Bruker impact hd [2fe-2s] Intact protein ms 
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