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TranscriptomicsGene expression of resting memory, resting naive and in vitro activated memory CD8+CD127+ T cells from spleen and bone marrow (BM)
To understand differences between resting and activated memory CD8+ T cells, we compared the global gene expression of ex vivo isolated naive and spleen and BM memory cells to in vitro activated spleen and BM memory cells. Single cell suspension from the spleen and bones of aged C57BL/6 mice were pr...
ORGANISM(S): Mus musculus 
2015-02-05 | E-GEOD-62691 | biostudies-arrayexpress
ProteomicsNeuropeptides in Lineus longissimus larvae
The goal of this project was to identify potential neuropeptides in extracts from larvae of the nemertean species Lineus longissimus.
ORGANISM(S): Lineus longissimus 
2022-02-16 | PXD023147 | Pride
Larva Neuropeptides Nemertea 
TranscriptomicsCD62L expression identifies a unique subset of polyfunctional CD56dim NK cells: Groups 1-3
Human Natural Killer (NK) cells comprise two main subsets, CD56bright and CD56dim cells, that differ in function, phenotype and tissue localization. To further dissect the heterogeneity of CD56dim cells, we have performed transcriptome analysis and functional ex vivo characterization of human NK cel...
ORGANISM(S): Homo sapiens 
2010-05-28 | E-GEOD-21774 | biostudies-arrayexpress
Proteomicsmuscular changes upon desmin mutation
a knockin mouse model was generatded that expresses the desmin mutant R405W either heterozygotic or homozygotic. the soleus muscle from 6 wt animals and each 6 aniamls with either heterzygotic or homozygotic mutation of desmin were extracted and embedded for cryotome sectioning. Muscle sections from...
ORGANISM(S): Mus musculus (Mouse) 
2025-11-10 | PXD042319 | Pride
Demin Tissue Fiber Muscle 
GenomicsTranscriptome analysis in very preterm infants with chronic lung disease after birth
Bronchopulmonary dysplasia (BPD) is the most common complication of prematurity and is characterized by impaired alveolar and vascular development. The aim of the study was to identify early BPD-relevant pathways by applying whole genome transcriptional profiling combined with protein measurements f...
EGAS00001002586 | EGA
ProteomicsAffinity purification mass spectrometry analysis of SARS-CoV-2 and SARS-CoV proteins in A549 cells
To determine the cellular binding partners of SARS-CoV-2 and SARS-CoV, A459 cells were transduced with lentiviruses expressing HA-tagged virus proteins and subjected to affinity purification mass spectrometry analysis.
ORGANISM(S): Homo sapiens (Human) 
2020-07-14 | PXD020222 | Pride
Sars-cov-2  sars-cov  apms  a549 cells 
GenomicsCodelink_HWG_CLD_B
Codelink Human Whole Genome from Blood taken at 72 hours after birht
EGAD00010001424 | EGA
GenomicsCodelink_HWG_noCLD_CB
Codelink Human Whole Genome from Blood taken at 72 hours after birht
EGAD00010001425 | EGA
GenomicsDAC for Transcriptome analysis in very preterm infants with chronic lung disease after birth
Data Access Committee EGAC00001000698
EGAC00001000698 | EGA
GenomicsSARS-CoV-2 escapes CD8 T cell surveillance via mutations in MHC-I restricted epitopes [10x]
CD8+ T cell immunity to SARS-CoV-2 has been implicated in COVID-19 severity and virus control. Here, we identified non-synonymous mutations in MHC-I restricted CD8+ T cell epitopes after deep sequencing of 747 SARS-CoV-2 virus isolates. Mutant peptides exhibited diminished or abrogated MHC-I binding...
EGAS00001005060 | EGA
2019 novel coronavirus infection 2019-nCoV infection coronavirus disease 2019 COVID-19 SARS-coronavirus 2 SARS-CoV-2 severe acute respiratory syndrome coronavirus 2 
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