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ProteomicsUbiquitinated sites on VPS34 by UBE3C LC-MSMS
Ubiquitinated sites on VPS34 identified by LC-MS/MS analysis of VPS34 derived from in vivo ubiquitination assays of UBE3C-transfected or -untransfected 293T cells.
ORGANISM(S): Homo sapiens (Human) 
2021-02-19 | PXD023959 | Pride
Vps34 Ubiquitinated sites Ube3c 
ProteomicsLarge-scale profiling of unexpected tryptic cleaved sites at ubiquitinated lysines
Trypsin specifically cleaves the C-terminus of lysine and arginine residues and is assumed to fails to cleave ubiquitin-modified sites. Based on this perception, the irregularly-cleaved ubiquitinated peptides were often regarded as false positives and discarded in proteomic analysis. Interestingly, ...
ORGANISM(S): Homo Sapiens 
2023-01-10 | PXD039353 |
ProteomicsQuantitative proteomics reveals extensive lysine ubiquitination in Arabidopsis thaliana
In this study, we describe an antibody-based approach to enrich ubiquitinated peptides from vegetative tissues for detection via peptide mass spectrometry. This enrichment method can be coupled with isobaric labeling to enable quantification from up to 18-multiplexed samples. This approach identifie...
ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702) 
2024-07-31 | MSV000095496 | MassIVE
UnknownSystematic approach for validating the ubiquitinated proteome.
Not available
S-EPMC2673951 | biostudies-literature
UnknownQuantitative Ubiquitinomics Revealed Abnormal Ubiquitinated ATP7A Involved in Down-Regulation of ACTH in Silent Corticotroph Adenomas.
Not available
S-EPMC9130458 | biostudies-literature
ProteomicsProtein ubiquitination in Aspergillus nidulans
Protein ubiquitination, an evolutionarily conserved post-translational modification process in eukaryotes, and plays an important role in many biological processes. Aspergillus nidulans, a model filamentous fungus, contributes to our understanding of cellular physiology, metabolism and genetics, but...
ORGANISM(S): Aspergillus 
2015-09-10 | PXD002299 | Pride
Lc-msms Aspergillus nidulans Ubiquitination Mycelial dvelopment 
UnknownIdentification of RNF114 as ADPr-Ub reader through non-hydrolysable ubiquitinated ADP-ribose.
Not available
S-EPMC12241653 | biostudies-literature
UnknownAntibody toolkit reveals N-terminally ubiquitinated substrates of UBE2W.
Not available
S-EPMC8322077 | biostudies-literature
UnknownEnhanced Purification of Ubiquitinated Proteins by Engineered Tandem Hybrid Ubiquitin-binding Domains (ThUBDs).
Not available
S-EPMC4824862 | biostudies-literature
UnknownIdentification of residues on Hsp70 and Hsp90 ubiquitinated by the cochaperone CHIP.
Not available
S-EPMC2917188 | biostudies-literature
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