Sort   by:  
 Page size 
TranscriptomicsL10_transcriptome
Transcriptional profile of inbreeding depression expressing as extreme cold-sensitivity. The experiment is a crossdesign of a conditional lethal line and an inbred control line, at permissive and a restrictive conditions (the latter involving a cold shock)
ORGANISM(S): Drosophila melanogaster 
2013-11-26 | E-MTAB-2120 | biostudies-arrayexpress
ProteomicsTitration of Sall4 by the NuRD complex facilitates neural differentiation of ES cells
Sall4 is a transcription factor essential for early mammalian development. Though it is reported to play an important role in embryonic stem (ES) cell self-renewal, whether it is an essential pluripotency factor has been disputed. Though Sall4 is known to associate with the Nucleosome Remodeling and...
ORGANISM(S): Mus musculus (Mouse) 
2016-08-02 | PXD003614 | Pride
Ap-ms of flag-tagged sall4 in mouse embryonic stem cells 
TranscriptomicsSaturated fat stimulates obesity and hepatic steatosis and affects gut microbiota composition by an enhanced overflow of dietary fat to the distal intestine
We studied the effect of dietary fat type, varying in polyunsaturated/saturated fatty acid ratio's (P/S) on development of metabolic syndrome. C57Bl/6J mice were fed purified high-fat diets (45E% fat) containing palm oil (HF-PO; P/S 0.4), olive oil (HF-OO; P/S 1.1) or safflower oil (HF-SO; P/S 7.8) ...
ORGANISM(S): Mus musculus 
2012-06-17 | E-GEOD-18586 | biostudies-arrayexpress
ProteomicsOn-chip AP-MS: Interaction proteomics on a microfluidics platform
Here we present a microfluidics-based affinity purification-mass spectrometry (AP-MS) pipeline to identify protein-protein interactions (PPI) using minute amounts of input material. The use of this automated platform allowed us to identify the human cohesin and CCC complex from only 4 micrograms of ...
ORGANISM(S): Homo sapiens (Human) 
2022-03-10 | PXD011323 | Pride
Interaction proteomics Low input Ap-ms 
ProteomicsOn-chip AP-MS: Interaction proteomics on a microfluidics platform
Essentially all cellular processes are orchestrated by protein-protein interactions (PPIs). In recent years, affinity purification coupled to mass spectrometry (AP-MS) has been the preferred method to identify cellular PPIs. Here we present a microfluidics-based (AP-MS) workflow to identify PPIs usi...
ORGANISM(S): Homo sapiens (Human) 
2019-04-02 | PXD012800 | Pride
Interaction proteomics Low input Ap-ms 
TranscriptomicsA compendium of hematopoietic regulators, chromatin modifiers and basal transcription factors occupy CBF-MYH11/RUNX1 target genes
Different mechanisms for CBF-MYH11 function in acute myeloid Leukemia (AML) with inv(16) have been proposed such as tethering of RUNX1 outside the nucleus, interference with transcription factor complex assembly and recruitment of histone deacetylases, all resulting in transcriptional repression of ...
ORGANISM(S): Homo sapiens 
2013-09-09 | E-GEOD-46044 | biostudies-arrayexpress
ProteomicsAn interaction landscape of ubiquitin signaling
This project paper describes, for the first time, a global, proteome-wide interaction screening for ubiquitin signaling. Our data reveals both cell type dependent and independent diubiquitin interactions. In additon, we show that certain proteins more potently bind to K6 diubiquitin upon induction o...
ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse) 
2017-02-08 | PXD004185 | Pride
Human Mouse Ubiquitin Lc-ms/ms 
TranscriptomicsSupplementary dietary calcium stimulates faecal fat and bile acid excretion, but does not protect against obesity and insulin resistance in C57BL/6J mice
There is increased interest in the potential protective role of dietary Ca in the development of metabolic disorders related to the metabolic syndrome. Ca-induced intestinal precipitation of fatty acids and bile acids as well as systemic metabolic effects of Ca on adipose tissue is proposed to play ...
ORGANISM(S): Mus musculus 
2011-03-03 | E-GEOD-18581 | biostudies-arrayexpress
ProteomicsFunctional analysis of somatic variants found in endometrial tumor-specific ER-alpha enhancers
Biological implications of healthy- and tumor-specific ERα cistromes in endometrial tumors have largely been understudied. Moreover, the functional impact of non-coding somatic variants has commonly been underexplored and remained elusive. This study is aimed to provide functional interpretation of ...
ORGANISM(S): Homo sapiens (Human) 
2025-04-15 | PXD029822 | Pride
Enhancers Endometrial cancer Er-alpha Somatic variants 
UnknownQuantification of corruption in preventative cost-based S-LCA: a contribution to the Oiconomy project.
Not available
S-EPMC6383569 | biostudies-literature
Sort   by:  
 Page size