Vessel function

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Organisms

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Mus musculus domesticus (2)
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Organisms

Mus musculus (99)
Homo sapiens (67)
Rattus norvegicus (12)
Danio rerio (9)
Arabidopsis thaliana (3)
Bos taurus (2)
Escherichia coli ATCC 8739 (1)
Mesocricetus auratus (1)
Drosophila melanogaster (1)
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feces metagenome (1)
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Sus scrofa (1)

Repository

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Tissue

Cell culture (8)
Microvascular endothelial cell (4)
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Blood plasma (3)
Brain (3)
Microvessel (3)
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Blood vessel (2)
HUVEC cell (2)
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Arteriole (1)
Blood (1)
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Brain microvessel endothelial cell (1)
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Cerebrospinal fluid (1)
Corpus luteum (1)
Dermal microvascular endothelial cell (1)
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Duodenum glandular cell (1)
Endothelial cell (1)
Endothelial cell of umbilical vein (1)
Endothelial cell of vascular tree (1)
Endothelium (1)
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Lymphatic vessel endothelium (1)

Disease

Normal (7)
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CVB3 infected (1)
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Liposarcoma (1)
IRAK-4 Q293X mutation (1)
Infected (1)
Colorectal carcinoma (1)
Cirrhosis (1)
Bordetella pertussis inoculated (1)
Locally advanced rectal cancer (1)
Short day torpor (1)
Viral myocarditis (1)
Coronary artery disease (1)
Unknown (1)
Angiosarcoma (1)
S enteritidis (1)
Prostate cancer (1)
None (1)
Intraductal papillary mucinous neoplasm (1)
Colorectal Neoplasms (1)

Technology Type

Mass Spectrometry (53)
Mass spectrometry (39)
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Mass spectrometry assay (14)
Bottom-up proteomics (14)
Data-independent acquisition (9)
Data-dependent acquisition (6)
NMR spectroscopy (4)
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SWATH MS (2)
Illumina MiSeq (1)
NMR spectroscopy assay (1)
Affinity proteomics (1)
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HDMSE (1)
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SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

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Illumina HiSeq 2500 (11)
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Python (1)
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QIAGEN TissueLyser II (1)
Isoflurane euthanasia chamber (1)
GeneChip Scanner 2500 (1)
Agilent 2100 bioanalyzer (1)
NanoDrop ND-1000 (1)
Covaris, NEBNext Ultra II DNA library prep kit (1)
Labfors 2 chemostat (Infors AG, Bottmingen, Switzerland) (1)
Do not apply (1)
FACS Aria II (1)
GeneSpring software V12 (Agilent). (1)
SureScan Dx (1)

Publication Date

2010 (159)
2015 (123)
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2013 (117)
2012 (115)
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2011 (87)
2008 (81)
2016 (72)
2009 (63)
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2022 (47)
2021 (45)
2017 (42)
2007 (40)
2020 (35)
2019 (32)
2018 (23)
2006 (15)
2005 (11)
2004 (2)
2003 (1)

UNIPROT ID/AC

1433E_HUMAN (6)
1433F_HUMAN (6)
1433G_HUMAN (6)
1433S_HUMAN (6)
1433T_HUMAN (6)
1433Z_HUMAN (6)
2A5A_HUMAN (6)
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2AAA_HUMAN (6)
2ABA_HUMAN (6)
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3HAO_HUMAN (6)
3HIDH_HUMAN (6)
41_HUMAN (6)
4EBP1_HUMAN (6)
4EBP2_HUMAN (6)
4F2_HUMAN (6)
5NT1A_HUMAN (6)
5NT3A_HUMAN (6)
5NTC_HUMAN (6)
5NTD_HUMAN (6)
6PGD_HUMAN (6)
6PGL_HUMAN (6)
8ODP_HUMAN (6)
9606.ENSP00000228938 (6)
9606.ENSP00000233596 (6)
9606.ENSP00000291295 (6)
9606.ENSP00000296098 (6)

CHEBI ID

CHEBI:30769 (13)
CHEBI:16335 (11)
CHEBI:16704 (10)
CHEBI:15891 (10)
CHEBI:6650 (10)
CHEBI:15741 (9)
CHEBI:16015 (9)
CHEBI:16750 (9)
CHEBI:18012 (9)
CHEBI:16027 (9)
CHEBI:16737 (9)
CHEBI:15354 (9)
CHEBI:16040 (8)
CHEBI:7916 (8)
CHEBI:17203 (8)
CHEBI:15428 (8)
CHEBI:16449 (8)
CHEBI:16919 (8)
CHEBI:17295 (8)
CHEBI:16708 (7)
CHEBI:28044 (7)
CHEBI:30887 (7)
CHEBI:18050 (7)
CHEBI:17568 (7)
CHEBI:16695 (7)
CHEBI:32816 (7)
CHEBI:21547 (7)
CHEBI:16467 (7)
CHEBI:17053 (7)
CHEBI:30915 (7)

Metabolite Name

Creatinine (16)
Creatine (16)
Adenosine (14)
Taurine (13)
Guanosine (13)
Hypoxanthine (13)
Uracil (12)
Adenine (12)
Cytidine (12)
L-Leucine (12)
L-Phenylalanine (12)
Inosine (12)
Cytosine (11)
Xanthine (11)
L-Tyrosine (11)
L-Alanine (10)
Thymine (10)
Choline (10)
L-Proline (10)
Guanine (10)
L-Glutamine (10)
Uridine (10)
Betaine (9)
L-Arginine (9)
L-Lysine (9)
L-Methionine (9)
L-Histidine (8)
Histamine (8)
L-Valine (8)
L-Isoleucine (8)

First Public Date

2025 (46)
2024 (37)
2026 (25)
2023 (24)
2014 (21)
2022 (13)
2020 (11)
2021 (10)
2019 (10)
2018 (9)
2015 (8)
2017 (7)
2016 (2)
2013 (2)

Modelling Approach

Ordinary differential equation model (1)

Study status

Recruiting (1)
Completed (1)

Lab affiliation

DZNE Munich, Neuroproteomics, Feodor-Lynen Str. 17, 81377 Munich, Germany (5)
Medical University of Vienna (3)
Institute for Stroke and Dementia Research (ISD) Klinikum der Universität München Feodor-Lynen-Str. 17 81377 Munich Germany (2)
-Translational Cardiomyology Laboratory, Stem Cell and Developmental Biology, Department of Development and Regeneration, KU Leuven, Leuven, Belgium -Histology and Medical Embryology Unit, Department of Anatomy, Histology, Forensic Medicine and Orthopaedics, Sapienza University of Rome, Rome, Italy (1)
1Center for Cardiovascular Regeneration, Department of Cardiovascular Sciences, Houston Methodist Research Institute. Houston Methodist, 6550 Fannin Street, Texas 77030, USA. (1)
1Division of Radiation Health, 2Department of Pharmaceutical Sciences, 3Neurobiology & Developmental Sciences, (1)
1Institute of Sports Medicine Copenhagen, Department of Orthopedic Surgery, Copenhagen University Hospital – Bispebjerg and Frederiksberg; Copenhagen, Denmark 2Department of Clinical Medicine, University of Copenhagen; Denmark (1)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany (1)
CRUK Beatson Institute (1)
Centre for Inflammatory Diseases, Department of Medicine, School of Clinical Sciences at Monash Health, Monash University, Clayton, VIC, 3168, Australia. (1)
Chinese Academy of Agricultural Sciences (1)
DZNE - German Center for Neurodegenerative Diseases Munich Neuroproteomics Feodor-Lynen Str. 17 D-81377 Munich Germany (1)
DZNE Munich, Neuroproteomics, Feodor-Lynen-Str. 17, 81377 München, Germany (1)
Department for Drug Design and Pharmacology, University of Copenhagen (1)
Department of Animal Anatomy and Physiology, Faculty of Biology and Biotechnology, University of Warmia and Mazury (1)
Department of Biochemistry and Molecular Biology, College of Basic Medicine, Key Laboratory of Medical Biotechnology of Hebei Province, Hebei Medical University, Shijiazhuang, China (1)
Department of Cardiology, Smidt Heart Institute and Proteomics and Metabolomics Core Facility (1)
Department of Life Sciences, Korea University, Seoul 02841, Republic of Korea (1)
Department of Molecular and Cellular Hemostasis, Sanquin Research, Amsterdam, 1066CX, The Netherlands (1)
Department of Physiological Sciences, Faculty of Medicine and Health Sciences, University of Barcelona and IDIBELL, Barcelona (Spain) Phone: +34 93 402 90 88 (1)
Department of Vascular Dysfunction, European Center for Angioscience, Medical Faculty Mannheim, Heidelberg University, Ludolf-Krehl-Straße 7-11, 68167 Mannheim, Germany. Department of Vascular Dysfunction, European Center for Angioscience, Medical Faculty Mannheim, Heidelberg University, Ludolf-Krehl-Straße 7-11, 68167 Mannheim, Germany. (1)
Discovery Proteomics Facility University of Oxford Target Discovery Institute, NDMRB Oxford, OX3 7FZ (1)
Division of Hematology and Central Hematology Laboratory, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Lausanne, Switzerland (1)
Faculty of life science, Global Health Institute, Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland. (1)
Helmholtz-Centrte for Environmental Research - UFZ GmbH Department of Molecular Systems Biology Permoserstr. 15 04318 Leipzig, Germany (1)
Institut de Pharmacologie et de Biologie Structurale, IPBS, Université de Toulouse, CNRS, UPS, Toulouse, France. (1)
Institute for Research in Immunology and Cancer, Québec, Canada (1)
Institute of Human Genetics, University Medical Center Hamburg-Eppendorf, Martinistraße 52, 20246 Hamburg, Germany (1)
Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China (1)
Key Laboratory of Vertebrate Evolution and Human Origins of Chinese Academy of Sciences, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing, 100044, China (1)

Keyword

Gadolinium 1,4,7,10-tetraazacyclododecane-N,N',N'',N'''-tetraacetate (1)
ProHance (1)
Gadovist (1)
MultiHance (1)
DOTAREM® (gadoterate meglumine) Injection for intravenous use (1)
Primovist (1)
Motor function assessment (1)
Cognitive function assessment (1)
Magnetic Resonance Imaging (MRI) (1)
Gadolinium (1)
Gadolinium-based contrast agent (GBCA) (1)
Gadolinium retention (1)
Neuroendocrine tumor (1)
Branch-duct intraductal papillary mucinous neoplasm (IPMN) of the pancreas (1)

IsPrivate

False (2)

Submitter Keywords

Immuno-oncology (1)

Classification

bacteria (2)
fungi (1)

Modification

4'-dihydroxyphenylalanine (1)
6-dioxaoctanediamine derivatized cysteine (1)

Study type

Transcription profiling by array (796)
RNA-seq of coding RNA (136)
RNA-seq of coding RNA from single cells (36)
ChIP-seq (27)
Unknown experiment type (18)
RNA-seq of non coding RNA (18)
RNA-seq of total RNA (8)
ChIP-chip by tiling array (6)
Other (6)
MicroRNA profiling by array (6)
Animal - One-color microarray (5)
ChIP-chip by array (5)
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Animal - High-throughput sequencing (4)
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Animal - Single-cell sequencing (2)
Human - High-throughput sequencing (2)
Plant - High-throughput sequencing (2)
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Baseline (1)

Release Date

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2020 (260)
2015 (231)
2016 (219)
2014 (213)
2019 (204)
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2011 (118)
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2009 (98)
2026 (55)
2007 (54)
2006 (26)
2005 (17)
2003 (5)
2004 (4)
2002 (2)
2000 (1)
1999 (1)
1998 (1)

Location

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Canada (1)
Brazil (1)
Austria (1)
China (1)
France (1)
Germany (1)
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United States (1)

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Active protein ubiquitination regulates xylem vessel functionality

Xylem vessels function in the long-distance conduction of water in land plants. The NAC transcription factor VASCULAR-RELATED NAC-DOMAIN7 (VND7) is a master regulator of xylem vessel cell differentiation in Arabidopsis (Arabidopsis thaliana). We previously isolated seiv (suppressor of ectopic xylem ...

ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress)

2024-10-17 | PXD048830 | Pride

Blood vessel-resident macrophages safeguard blood and vessel integrity in zebrafish

PRJNA1260425 | ENA

Hyperactive KRAS/MAPK signaling disrupts normal lymphatic vessel architecture and function

PRJNA1000777 | ENA

Blood-resident macrophages safeguard blood and vessel integrity

Macrophages are essential in immune defence, tissue development, and disease onset and progression. Their function is in part dictated by their microenvironment and origin. Tissue-resident macrophages originate from yolk sac progenitors, persisting in adult organs and tissues mainly through self-ren...

ORGANISM(S): Danio rerio (Zebrafish) (Brachydanio rerio)

2026-03-11 | PXD052344 | Pride

Blood-resident macrophages

Regulation of Collecting Lymphatic Vessel Contractile Function by TRPV4 Channels

PRJNA1251083 | ENA

Attenuated inflammatory profile following single and repeated handgrip exercise and remote ischemic preconditioning in patients with cerebral small vessel disease

Similar to remote ischemic preconditioning bouts of exercise may possess immediate protective effects against ischemia-reperfusion injury. However, underlying mechanisms are largely unknown. This study compared the impact of single and repeated handgrip exercise versus remote ischemic preconditionin...

ORGANISM(S): Homo sapiens (Human)

2023-03-11 | PXD037267 | Pride

Exercise Inflammation Remote ischemic preconditioning Cerebral small vessel disease Proteomics.

Fate and State Transitions during Human Blood Vessel Organoid Development: Time Course

Human blood vessel organoids (hBVOs) derived from human pluripotent stem cells have emerged as a novel system to understand human vascular development, model disorders, and develop regenerative therapies. However, it was unclear which molecular states constitute hBVOs and how cells differentiate and...

ORGANISM(S): Homo sapiens

2025-03-21 | E-MTAB-14807 | biostudies-arrayexpress

Inhibition of proprotein convertase SKI-1 prevents blood vessel alteration following stroke

PRJNA1280962 | ENA

Proteome analysis of brain microvessels from htra1 KO mice

CARASIL (cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathyis) a small-vessel disease caused by loss of function mutaions of htrA1, which cleaves several extracellular matrix proteins. Here, we isolated microvessels from htra1 KO and wild type control mice to...

ORGANISM(S): Mus musculus (Mouse)

2018-08-03 | PXD009411 | Pride

Small vessel disease Microvessel Carasil

Gene expression analysis in control and HIF-2 alpha deficient murine lung endothelial cells under hypoxia

Journal : Blood. 2009 Jul 9;114(2):469-77. Epub 2009 May 13. Title : Endothelial deletion of hypoxia-inducible factor-2alpha (HIF-2alpha) alters vascular function and tumor angiogenesis. Authors : Skuli N, Liu L, Runge A, Wang T, Yuan L, Patel S, Iruela-Arispe L, Simon MC, Keith B. Abstract : Hyp...

ORGANISM(S): Mus musculus

2009-07-15 | E-GEOD-16067 | biostudies-arrayexpress

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