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ProteomicsGluconeogenic/Glycolytic growth in P. putida KT2440 and C. testosteroni Kf1
Data comparing protein expression during gluconeogenic growth (on succinate) versus glycolytic growth (on gluconate) of P. putida KT2440 and C. testosteroni Kf1. Quantification by diDO-IPTL (Waldbauer et al. 2017 Analytical Chemistry).
ORGANISM(S): Pseudomonas Putida Kt2440 (ncbitaxon:160488) Comamonas Testosteroni Kf-1 (ncbitaxon:399795) 
2021-07-01 | MSV000087734 | MassIVE
ProteomicsS. islandicus REY15A pH/Temp stress
diDO-IPTL quantitative analysis (Waldbauer et al. 2017 Anal. Chem.) of pH- and temperature-stress during mid-log and early-stationary phase growth of S. islandicus REY15A
ORGANISM(S): Sulfolobus Islandicus Rey15a (ncbitaxon:930945) 
2022-10-21 | MSV000090562 | MassIVE
ProteomicsC. testosteroni aromatic compound metabolism
Data comparing protein expression during growth of Comamonas testosteroni Kf1 on succinate with growth on 3 aromatic substrates (vanillate, terephthalate, 4-hydroxybenzoate). Quantification by diDO-IPTL (Waldbauer et al. 2017 Analytical Chemistry).
ORGANISM(S): Comamonas Testosteroni Kf-1 (ncbitaxon:399795) 
2021-11-19 | MSV000088418 | MassIVE
ProteomicsPseudomonas putida membrane vesicles
Cellular and membrane vesicle proteomes from Pseudomonas putida KT2440 and engineered derivative strains. Proteomic quantification by diDO-IPTL (Waldbauer et al. 2017 Analytical Chemistry).
ORGANISM(S): Pseudomonas Putida Kt2440 (ncbitaxon:160488) 
2025-01-31 | MSV000097014 | MassIVE
ProteomicsD vulgaris WT-IPFG07 chemostat comparison
Parallel chemostats of Desulfovibrio vulgaris Hildenborough WT and IPFG07 (DsrC low-expression) mutant were sampled over 5 turnovers at steady-state. Extracted proteins were digested with trypsin and peptides were isotopically labeled for quantification using the diDO-IPTL methodology (Waldbauer et ...
ORGANISM(S): Desulfovibrio Vulgaris Str. Hildenborough (ncbitaxon:882) 
2018-11-26 | MSV000083165 | MassIVE
ProteomicsMiddle Island Sinkhole Microbial Mat - Seasonality
Samples from benthic phototrophic microbial mats of Middle Island Sinkhole, Lake Huron, MI, USA. Peptides labeled in vitro for quantitative analysis by diDO-IPTL (Waldbauer et al. 2017 Anal. Chem.).
ORGANISM(S): Microbial Mat Metagenome (ncbitaxon:527640) 
2022-01-20 | MSV000088706 | MassIVE
ProteomicsdiDO-IPTL method publication data
Data demonstrating utility of diDO-IPTL labeling method for quantitative proteomics
ORGANISM(S): Desulfovibrio Vulgaris Str. Hildenborough (ncbitaxon:882) 
2017-01-08 | MSV000080457 | MassIVE
ProteomicsSynechococcus WH8102/cyanophage S-SM1 15N incorporation
Dataset showing incorporation of extracellular nitrogen (as 15NO3) into phage proteins during infection of a marine cyanobacterium
ORGANISM(S): Synechococcus Cyanophage S-sm1 (ncbitaxon:382277) Synechococcus Sp. Wh 8102 (ncbitaxon:84588) 
2019-05-20 | MSV000083830 | MassIVE
MetabolomicsChitin utilization by marine picocyanobacteria and the evolution of a planktonic lifestyle.
Marine picocyanobacteria Prochlorococcus and Synechococcus, the most abundant photosynthetic cells in the oceans, are generally thought to have a primarily single-celled and free-living lifestyle. However, while studying the ability of picocyanobacteria to supplement photosynthetic car...
2024-02-21 | MTBLS5229 | MetaboLights
ProteomicsOstreococcus OlV1/OlV7 lysate DOM
Dissolved organic matter extracts prepared by viral lysates of Ostreococcus lucimarinus CCMP2972, infected by lytic viruses OlV1 and OlV7, as well as uninfected controls, under standard-light (~110uE/m2s; "SL") and low-light (15uE/m2s, "LL") irradiance.
ORGANISM(S): Ostreococcus Lucimarinus Cce9901 (ncbitaxon:436017) Ostreoccus Lucimarinus Virus Olv7 Ostreococcus Lucimarinus Virus 1 (ncbitaxon:880162) 
2019-02-12 | MSV000083434 | MassIVE
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