Wallace J J - OmicsDI

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biostudies-arrayexpress (20)
pride (16)
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Disease

Crohn's disease (4)
Acute leukemia (2)
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Technology Type

Mass Spectrometry (16)
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Mass spectrometry (6)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)
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SWATH MS (1)

Instrument Platform

Exactive (Thermo Scientific) (3)
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Q Exactive Plus (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase - Exactive (Thermo Scientific) (1)
Liquid Chromatography MS - positive - HILIC - Exactive (Thermo Scientific) (1)

Publication Date

2008 (7)
2024 (6)
2011 (5)
2021 (4)
2020 (4)
2017 (4)
2016 (4)
2022 (3)
2014 (2)
2007 (2)
2023 (2)
2015 (1)
2013 (1)
2010 (1)
2009 (1)
2026 (1)
2025 (1)
2019 (1)

UNIPROT ID/AC

P02741 (4)
P05231 (4)
P08887 (4)

CHEBI ID

CHEBI:15729 (4)
CHEBI:15603 (3)
CHEBI:16015 (3)
CHEBI:17775 (3)
CHEBI:18050 (3)
CHEBI:43355 (3)
CHEBI:52217 (2)
CHEBI:15676 (2)
CHEBI:15698 (2)
CHEBI:15756 (2)
CHEBI:15891 (2)
CHEBI:15956 (2)
CHEBI:15971 (2)
CHEBI:16235 (2)
CHEBI:16283 (2)
CHEBI:16349 (2)
CHEBI:16414 (2)
CHEBI:16450 (2)
CHEBI:16467 (2)
CHEBI:16634 (2)
CHEBI:16643 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16737 (2)
CHEBI:16750 (2)
CHEBI:16857 (2)
CHEBI:17084 (2)
CHEBI:17115 (2)
CHEBI:17191 (2)
CHEBI:17203 (2)

Metabolite Name

4-Pyridoxic acid (2)
Citric acid (2)
()-(E)-13-Hydroxy-10-oxo-11-octadecenoic acid (1)
()-1516-Dihydroxyoctadecanoic acid (1)
()-Quebrachidine (1)
(-)-11-Hydroxy-91516-trioxooctadecanoic acid (1)
(-)-Ethyl 3-acetoxy-2-methylbutyrate (1)
(-)-Farnesiferol C (1)
(-)-Matairesinol (1)
(-)-Methyl 5-acetoxyhexanoate (1)
(-)-erythro-Anethole glycol 1-glucoside (1)
(-)-erythro-Anethole glycol 2-glucoside (1)
(10betaH11xi)-11-Hydroxy-13-nor-6-eremophilen-8-one (1)
(1R)-Nepetalic acid (1)
(1R2R)-Isocitric acid (1)
(1R3R4R5S6S8x)-1-Acetoxy-8-angeloyloxy-34-epoxy-5-hydroxy-7(14)10-bisaboladien-2-one (1)
(1R3S4S6R)-69-Dihydroxyfenchone 6-O-b-D-glucoside (1)
(1R4R5S)-5-Hydroxyfenchone glucoside (1)
(1R4S6R)-6-Hydroxyfenchone glucoside (1)
(1S3R4R)-810-Dihydroxyfenchone 10-O-b-D-glucoside (1)
(1S4R)-10-Hydroxyfenchone glucoside (1)
(2E4Z8E)-Colneleic acid (1)
(2R)-1-O-beta-D-Galactopyranosylglycerol (1)
(3a5b)-24-oxo-24-(2-sulfoethyl)aminocholan-3-yl-b-D-Glucopyranosiduronic acid (1)
(3alpha5alpha9xi10beta)-O-(3-Hydroxy-7-drimen-11-yl)umbelliferone (1)
(3b4b5b)-45-Epoxy-p-menth-1-en-3-ol 3-glucoside (1)
(4R5S7R11S)-1112-Dihydroxy-1(10)-spirovetiven-2-one 11-glucoside (1)
(4R5S7R11x)-1112-Dihydroxy-1(10)-spirovetiven-2-one 12-glucoside (1)
(4S6R)-p-Mentha-18-diene-67-diol 7-glucoside (1)
(4S8R)-89-Dihydroxy-p-menth-1(6)-en-2-one (1)

IsPrivate

False (4)

First Public Date

2020 (1)

Modelling Approach

Ordinary differential equation model (4)

Study type

Transcription profiling by array (17)
RNA-seq of coding RNA (2)
RNA-seq of non coding RNA (1)

Release Date

2023 (298)
2021 (286)
2022 (280)
2025 (254)
2024 (253)
2020 (203)
2018 (179)
2019 (167)
2016 (132)
2015 (110)
2017 (105)
2014 (94)
2013 (63)
2011 (53)
2010 (50)
2012 (50)
2009 (43)
2008 (33)
2026 (32)
2007 (17)
2006 (9)
2002 (4)
2005 (3)
1999 (2)
2004 (1)
2003 (1)
2001 (1)
2000 (1)
1998 (1)

Lab affiliation

Duke University (2)
Technische Universität München, Dept. Chemistry, Chair of Biotechnology (2)
Biomolecular Measurement Division, National Institute of Standards and Technology (NIST) (1)
Center for Network Systems Biology, Boston University, USA (1)
Children's Hospital of Philadelphia (1)
Dana-Farber Cancer Institute Harvard Medical School (1)
Department of Agronomy and Horticulture, Center for Plant Science Innovation, Beadle Center for Biotechnology, University of Nebraska, Lincoln, NE (1)
Full Professor for Analytical Chemistry Vienna University of Technology Institute of Chemical Technologies and Analytics Getreidemarkt 9/E164 A-1060 Vienna Austria Associate Professor for Biochemistry Medical University of Graz Diagnostic and Research Institute of Pathology Stiftingtalstrasse 24 A-8010 Graz Austria (1)
Leader – Renal Research Group Assoc. Professor, University of Bergen Consultant Nephrologist, Haukeland University Hospital (1)
Member, Stanford Cancer Institute (1)
Research unit "Functional proteomics and metabolic pathways", Institute of Pathology, medical University of Graz, Graz, Austria (1)
Roderick O’Sullivan Ph.D., Dept. Pharmacology & Chemical Biology, University of Pittsburgh, UPMC Hillman Cancer Center, 5115 Centre Avenue Pittsburgh, PA 15213, USA (1)
University of Bergen (1)
Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of 6 Technology and Emory University, Atlanta, GA, USA (1)

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Human retinal transmitochondrial cybrids with J or H mtDNA haplogroups respond differently to ultraviolet radiation: implications for retinal diseases.

Not available

S-EPMC4053329 | biostudies-literature

Sheila Wallace

Not available

S-EPMC1125794 | biostudies-literature

Risk Adjustment And Promoting Health Equity In Population-Based Payment: Concepts And Evidence.

Not available

S-EPMC9901844 | biostudies-literature

Reproducibility of Ocular Surface Staining in the Assessment of Sjogren Syndrome-Related Keratoconjunctivitis Sicca: Implications on Disease Classification.

Not available

S-EPMC6710016 | biostudies-literature

Structural characterization of viral ortholog of human DNA glycosylase NEIL1 bound to thymine glycol or 5-hydroxyuracil-containing DNA.

Not available

S-EPMC3281731 | biostudies-literature

Polyesterase discovery in Pseudomonas pseudoalcaligenes secretome

By screening the secretomes of polymer induced Pseudomonas pseudoalcaligenes we identify a new enzyme PpEst that can degrade the co-aliphatic-aromatic polyester poly(1,4-butylene adipate-co-terephthalate) (PBAT). The discovered enzyme has predicted arylesterase activity and is induced by PBAT added ...

ORGANISM(S): Pseudomonas pseudoalcaligenes

2016-12-13 | PXD004014 | Pride

Systematic evaluation and modulation of HLA class I downregulation in Merkel cell carcinoma

Lee PC, Klaeger S, Le PM, Korthauer K, Cheng J, Wong A, Tarren A, Lemvigh C, Sarkizova S, Li L, Frost TC, Nomburg J, Liu X, Pomerance L, Doherty L, Witten E, Zhang W, Apffel A, Wallace L, Neuberg D, Olsen L, Thakuria M, Clauser K, Starrett G, Doench J, Buhrlage SJ, Carr SA, DeCaprio JA, Wu CJ, Keski...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2021-04-20 | MSV000087251 | MassIVE

Inherited mitochondrial DNA variants can affect complement, inflammation and apoptosis pathways: insights into mitochondrial-nuclear interactions.

Not available

S-EPMC4049308 | biostudies-literature

A sleep promotion program for insufficient sleep among adolescents: a pilot feasibility randomized controlled trial.

Not available

S-EPMC11874094 | biostudies-literature

Mitochondrial DNA variants can mediate methylation status of inflammation, angiogenesis and signaling genes.

Not available

S-EPMC4512622 | biostudies-literature

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