Sort   by:  
 Page size 
TranscriptomicsNon-coding RNA tiling array in rice
The 1 Mb tiling array was used to represent the 10.0 Mb to 11.0 Mb region of japonica rice Chromosome 10. A tile path was designed with 36-mer probes at a step of 5 nt. All 388,994 probes were retained and synthesized into a single array. This array was hybridized to the cDNA target used for the ful...
ORGANISM(S): Oryza sativa 
2010-06-11 | E-GEOD-6922 | biostudies-arrayexpress
TranscriptomicsDevelopment of a versatile, target-oriented tiling microarray assay for measuring allele-specific gene expression
In the study of gene expression regulation in plants, it is often desirable to distinguish transcript pools derived from different alleles present in the same organism. We report here an oligonucleotide tiling microarray designed to specifically target 518 single nucleotide polymorphisms (SNPs) betw...
ORGANISM(S): Oryza sativa 
2010-07-01 | E-GEOD-20678 | biostudies-arrayexpress
TranscriptomicsTranscriptional Analysis of 1M Regions in Medicago truncatula Using Tiling Microarrays
We report here a transcriptonal analysis in six different organ types of a approximately 1 Mb region in legume plants barrel medic (Medicago truncatula) which is sytenic with soybean (Glycine max). We used oligonucleotide tiling microarrays to detecte transcription of over 80% of the predicted genes...
ORGANISM(S): Medicago truncatula 
2010-05-26 | E-GEOD-10055 | biostudies-arrayexpress
TranscriptomicsTranscriptional Analysis of 1M Regions in Glycine max Using Tiling Microarrays
We report here a transcriptonal analysis in six different organ types of a approximately 1 Mb region in soybean (Glycine max) which is sytenic with legume (Medicago truncatula). We used oligonucleotide tiling microarrays to detecte transcription of over 80% of the predicted genes in both species. We...
ORGANISM(S): Glycine max 
2010-05-26 | E-GEOD-10056 | biostudies-arrayexpress
ProteomicsHuman cholangiocarcinoma LC-MS/MS
We studied the effect of Ser30 with or without O-GlcNAc modification on K18 protein and its co-immunoprecipitated proteins in cholangiocarcinoma cells.The lysates from HuCCT1 shK18 stable cell line transfected with FLAG-K18-WT or FLAG-K18-S30A were captured with anti-FLAG beads, and then subjected t...
ORGANISM(S): Homo sapiens (Human) 
2024-06-22 | PXD048144 | Pride
Hucct1 cells Proteomics K18 
TranscriptomicsTranscriptional Analysis of Medicago truncatula and Glycine max Using Tiling Microarrays
This SuperSeries is composed of the following subset Series: GSE10055: Transcriptional Analysis of 1M Regions in Medicago truncatula Using Tiling Microarrays GSE10056: Transcriptional Analysis of 1M Regions in Glycine max Using Tiling Microarrays Keywords: tiling array, transcriptional analysis Both...
ORGANISM(S): Glycine max 
2010-05-26 | E-GEOD-10151 | biostudies-arrayexpress
ProteomicsHuman cholangiocarcinoma LC-MS/MS
The glycosylation landscape of Human cholangiocarcinoma (CCA), and how it affects CCA diagnosis and prognosis, has recently emerged as an appealing research field.In this study, we used chemical glycoproteomic analysis Click-iG for systematic profiling of intact glycopeptides in CCA and HIBEpiC cell...
ORGANISM(S): Homo sapiens (Human) 
2024-06-22 | PXD048188 | Pride
Glycoproteomics Click-ig Cholangiocarcinoma 
TranscriptomicsGenome-wide Expression Profiles of Drought and High-salinity Stresses-responsive Genes in Rice (Oryza Sativa L. Indica)
Three rice major tissues, namely flag leaf, shoot and panicle, were involved in this study. Each tissue had two kinds stress treatment, drought and high salinity, in 3 different time courses. For drought treated samples, an additional water recovery was applied. Each experiment had three replicates....
ORGANISM(S): Oryza sativa 
2010-06-05 | E-GEOD-6533 | biostudies-arrayexpress
TranscriptomicsEpigenetic modifications and their relationships to smRNA and mRNA transcriptomes in maize
Genome-wide and organ-specific landscapes of epigenetic modifications and their relationships to mRNA and smRNA transcriptomes in maize We report an integrated genome-wide analysis of DNA methylation, histone modifications, smRNAs and mRNA transcriptional activity, using maize as a model. We surveye...
ORGANISM(S): Zea mays 
2009-04-27 | E-GEOD-15286 | biostudies-arrayexpress
UnknownQuantification and optimization of platinum-molybdenum carbide interfacial sites to enhance low-temperature water-gas shift reaction.
Not available
S-EPMC11775272 | biostudies-literature
Sort   by:  
 Page size