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TranscriptomicsComparison of metastasis-inclined microenvironment (MIM) and metastasis-averse microenvironment (MAM) HCC patients
To determine the role of the hepatic microenvironment in HCC metastasis, we compared the gene expression profiles of 20 noncancerous surrounding hepatic tissues from two HCC patient groups, those with primary HCC together with venous metastasis which we termed a metastasis-inclined microenvironment ...
ORGANISM(S): Homo sapiens 
2010-07-01 | E-GEOD-5093 | biostudies-arrayexpress
TranscriptomicsArrayCGH of human hepatocellular carcinoma (HCC)
We used array-based comparative genomic hybridization (arrayCGH) of 76 hepatocellular carcinomas (HCCs) to search for genetically disrupted genes. Seventy-six HCC clinical specimens were analyzed. Genomic DNA of the tumor sample was labeled with Cy5 and reference normal DNA (Promega) was labeled wit...
ORGANISM(S): Homo sapiens 
2012-01-20 | E-GEOD-14322 | biostudies-arrayexpress
UnknownCan therapeutic drug monitoring increase the safety of Imatinib in GIST patients?
Not available
S-EPMC5806097 | biostudies-literature
Genomicseaa4975f-4514-44a7-baa4-9404c42156a2 - samples
Whole genome sequencing dataset of 54 tumor/normal samples of 25 cHCC-ICC cases.
EGAD00001005181 | EGA
Genomics61f6508f-ab66-4d36-ad86-028a0ff97746 - samples
The whole exome sequencing data of 291 tumor/normal samples from 121 cHCC-ICC cases.
EGAD00001005183 | EGA
Genomics77745784-0040-45d2-af14-10f27f05a48d - samples
The RNA-seq data of 97 tumor samples from 77 cHCC-ICC cases, data of two other HCC tumor samples were also included.
EGAD00001005182 | EGA
GenomicsGenomic and transcriptomic profiling of combined hepatocellular and intrahepatic cholangiocarcinoma reveals distinct molecular subtypes
We performed genomic and transcriptomic sequencing of 133 combined hepatocellular and intrahepatic cholangiocarcinoma (cHCC-ICC) cases, including separate, combined, and mixed subtypes.
EGAS00001003093 | EGA
GenomicsPKU_cHCC-ICC DAC
Data Access Committee EGAC00001001273
EGAC00001001273 | EGA
TranscriptomicsReprogramming fibroblasts into bi-potential hepatic stem cells by defined factors
Recent studies have demonstrated direct reprogramming of fibroblasts into a range of somatic cell types, but to date stem/progenitor cells have only been reprogrammed for the blood and neuronal lineages. We previously reported generation of induced hepatocyte-like (iHep) cells by transduction of Gat...
ORGANISM(S): Mus musculus 
2013-07-19 | E-GEOD-48486 | biostudies-arrayexpress
Genomicsena-DATASET-dkfz_b062-21-02-2018-14:40:33:479-591 - samples
This dataset contains whole exome sequencing data from 24 patients. The Agilent SureSelect Human All Exon 50-Mb target enrichment kit was used to capture all human exons for deep sequencing. For each patient a tumour and control sample has been sequenced on a Illumina HiSeq2000 instrument in paired-...
EGAD00001003973 | EGA
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