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ProteomicsGlobal RNA-Protein Interactome purification screening identifies RRP1 in IL-1-stimulated BMDM cells
An “unbiased” approach that holds promise for isolating total protein-RNA complexes from whole cell samples without any labeling and identifying RBPs that lack classical RNA-binding domains (RBDs) or that bind different RNA classes is greatly needed. On the other hand, due to the scarcity of primary...
ORGANISM(S): Mus musculus (Mouse) 
2025-07-04 | PXD054800 | Pride
Rna-binding protein  primary macrophages  il-1 
ProteomicsA proteomic landscape of diffuse-type gastric cancer
Here we present a dataset from 84 DGC patients with paired tumor and nearby tissue. Tumors and their nearby tissues were evaluated by pathologists. Nearby tissues were designated as non-cancerous and were greater than 5 cm away from the surgery margin. Hematoxylin and eosin (H&E) stained sections we...
ORGANISM(S): Homo sapiens (Human) 
2018-02-09 | PXD008840 | Pride
Gastric cancer Proteome 
TranscriptomicsTranscriptome sequencing of Brassica oleracea tissues
Deep sequencing of mRNA from seven different tissues of Brassica oleracea Analysis of ploy(A)+ RNA of multiple different tissues of Brassica oleracea containing Bud, Callus, Root, Stem, Leaf, Flower and Silique.
ORGANISM(S): Brassica oleracea 
2014-05-27 | E-GEOD-42891 | biostudies-arrayexpress
ProteomicsThe analysis of the α2,6-sialylated proteins in endometrium from porcine gestational day 15 by LC-MS/MS
Implantation is the attachment of embryo in the endometrium. Failure in implantation is a major cause of early pregnancy loss. During implantation, the temporal uterine lumen closure can help embryo attach to the uterus. In pigs, extending of endometrial folds to form interlocking finger-like projec...
ORGANISM(S): Sus scrofa domesticus (domestic pig) 
2022-02-17 | PXD027571 | Pride
Porcine pregnancy Α2 6-sialylated proteins Endometrium Lc-ms/ms 
ProteomicsNeuro-2a drug treatment iTRAQ - A Bivalent Securinine Compound SN3-L6 Induces Neuronal Differentiation via Translational Upregulation of Neurogenic Transcription Factors
This project studies a compound, which induces potent neuronal differentiation, by using iTRAQ-based proteomic analysis in Neuro-2a progenitor cells.
ORGANISM(S): Mus musculus (Mouse) 
2018-10-19 | PXD009180 | Pride
Neuro-2a cells Itraq 
UnknownHypoxia inducible factor-1α regulates microglial innate immune memory and the pathology of Parkinson's disease.
Not available
S-EPMC10981320 | biostudies-literature
UnknownPro-survival and anti-inflammatory roles of NF-κB c-Rel in the Parkinson's disease models.
Not available
S-EPMC6994410 | biostudies-literature
UnknownCritical Role of Cytosolic DNA and Its Sensing Adaptor STING in Aortic Degeneration, Dissection, and Rupture.
Not available
S-EPMC6939474 | biostudies-literature
ProteomicsStructure and mechanism of CSP secretion pump of ComA for Quorum sensing
Cross-linking MS data for 1) ComA Apo form and 2) ComA +ATP form. Purified proteins were cross-linked with DSSO, digested with either trypsin or chymotrypsin, and acquired by MS2-MS3 acquisition method. 2 technical replicates were acquired for each digested sample.
ORGANISM(S): Cellular Organisms 
2023-08-31 | PXD038058 | JPOST Repository
ProteomicsiTRAQ-based quantitative analysis of age-specific variation in salivary proteome of caries-susceptible individuals
Human saliva is a protein-rich, easily accessible source of potential biomarkers for the diagnosis of oral and systemic diseases. However, little is known about the changes in salivary proteome associated with aging of patients with dental caries. Herein, we applied iTRAQ-based quantitative approach...
ORGANISM(S): Homo Sapiens 
PXD011067 |
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