Warehouse - OmicsDI

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Unknown (915)
Genomics (34)
Transcriptomics (22)
Proteomics (12)
Genomic (10)
Metabolomics (2)

Organisms

Homo sapiens (17)
Aerococcus urinae NBRC 15544 = CCUG 36881 (11)
Alteromonadales (11)
Bacteria (11)
Canis lupus familiaris (11)
Carya cathayensis (11)
Ectopseudomonas oleovorans CECT 5344 (11)
Ensifer adhaerens (11)
Enterococcus faecalis (11)
Globicatella sanguinis (11)
Halictus scabiosae (11)
Histomonas meleagridis (11)
Human immunodeficiency virus 1 (11)
Mesocricetus auratus (11)
Methylohalobius crimeensis 10Ki (11)
Mus musculus (11)
Olavius algarvensis sulfate-reducing endosymbiont (11)
Ophrys garganica (11)
Ophrys sphegodes (11)
Pseudomonas aeruginosa SJTD-1 (11)
Rabies virus Nishigahara RCEH (11)
Rattus norvegicus (11)
Rattus rattus (11)
Rhodococcus jostii RHA1 (11)
Rhodopseudomonas palustris (11)
Schizosaccharomyces pombe 927 (11)
Shigella (11)
Streptomyces coelicolor (5)
Mus musculus (2)
Rattus norvegicus (2)

Organisms

Homo sapiens (14)
Mucilaginibacter hurinus (2)
Mus musculus (2)
Cadra cautella (1)
Sporosarcina sp. ANT_H38 (1)
Chaetomium globosum (1)
Rattus norvegicus (1)
soil metagenome (1)

Repository

ENA (30)
biostudies-arrayexpress (17)
pride (11)
dbGaP (10)
geo (5)
EGA (4)
MetaboLights (2)
MassIVE (1)

Tissue

Peripheral blood mononuclear cell (3)
Blood (1)
Palate (1)
Rheumatoid arthritis disease specific synovial fluid (1)
Tongue (1)
Tonsil (1)
Venom (1)

Disease

Chronic lymphocytic leukemia (3)
DNA repair deficiency (1)
"hyperglycaemic, obese and insulin resistant" (1)
Head and neck squamous cell carcinoma (1)
Psoriatic arthritis (1)
Rheumatoid arthritis (1)

Technology Type

Mass Spectrometry (11)
Top-down proteomics (6)
Shotgun proteomics (5)
Mass spectrometry (2)
Bottom-up proteomics (2)
Immunopeptidomics (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)

Instrument Platform

LTQ Orbitrap XL (1)
LECO Pegasus 4D GCxGC-TOF-MS (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2010 (7)
2009 (3)
2008 (3)
2013 (2)
2007 (2)
2026 (2)
2006 (2)
2021 (2)
2024 (2)
2023 (2)
2020 (2)
2015 (1)
2018 (1)
2025 (1)
2017 (1)
2022 (1)
2019 (1)
2016 (1)

CHEBI ID

CHEBI:30968 (1)
CHEBI:86948 (1)
CHEBI:474859 (1)
CHEBI:36432 (1)
CHEBI:77517 (1)
CHEBI:32397 (1)
CHEBI:32399 (1)
CHEBI:47034 (1)
CHEBI:37519 (1)
CHEBI:48614 (1)
CHEBI:39558 (1)
CHEBI:38760 (1)
CHEBI:38997 (1)
CHEBI:22154 (1)
CHEBI:48615 (1)
CHEBI:88448 (1)
CHEBI:69775 (1)
CHEBI:79516 (1)
CHEBI:132905 (1)
CHEBI:32931 (1)
CHEBI:53505 (1)
CHEBI:20198 (1)
CHEBI:19662 (1)
CHEBI:77915 (1)
CHEBI:37966 (1)
CHEBI:37965 (1)
CHEBI:35593 (1)
CHEBI:47136 (1)
CHEBI:38884 (1)
CHEBI:53732 (1)

Metabolite Name

Erythro-2-methyl-3,4-dibromo-2-butanol (1)
Endo-2,3-o-ethylidene-alpha-d-erythrofuranose (1)
6E,11E-tridecadien-1-ol acetate (1)
11E-hexadecenoic acid, ethyl ester (1)
Dodecanoic acid, ethyl ester (1)
Dl-valine, n-acetyl-, ethyl ester (1)
Dl-methionine, n-acetyl-, ethyl ester (1)
DL-leucine, n-acetyl-, ethyl ester (1)
Alanyl-L-leucine (1)
Dimethyl sulfoxide (1)
Dimethyl phthalate (1)
Diisopropylacetamide (1)
Diethyle 2-hydroxypentanedioate (1)
Diethylpimelate (1)
Diethyl glutaconate (1)
Diethyl ethylidenemalonate (1)
Diethyl 2-methylsuccinate (1)
Dideutero-(E)-alpha-methylstyrene (1)
Decane-1,2-D2 (1)
Alpha-butyl-cyclopropanemethanol (1)
2,2-dimethyl-3-cis-[à-(carboxymethyl)-allyl]-cyclopropanecarboxylic acid (1)
2,6-ditert-butyl-4-methylphenyl 1-methylcyclopropanecarboxylate (1)
(prop-2-en-1-ylidene)cyclopropane (1)
Cyclopentene (1)
Cis-2-ethenyl-cyclopentanecarboxylic acid (1)
1,3-dimethylcyclopentane (1)
1-ethyl-1-methyl-cyclopentane (1)
(3-methylbutyl)-cyclopentane (1)
2-propyl-cyclohexanone (1)
Cyclohexanepropanoic acid, ethyl ester (1)

First Public Date

2014 (5)
2026 (4)
2024 (3)
2018 (3)
2017 (3)
2013 (3)
2023 (2)
2016 (2)
2015 (2)
2022 (1)
2021 (1)
2020 (1)

Study type

Transcription profiling by array (12)
Comparative genomic hybridization by array (3)
Genotyping by array (1)
RNA-seq of coding RNA (1)

Release Date

2024 (129)
2025 (126)
2022 (119)
2021 (115)
2023 (110)
2020 (73)
2019 (52)
2018 (52)
2017 (36)
2016 (23)
2014 (16)
2015 (12)
2013 (12)
2026 (12)
2010 (11)
2012 (11)
2009 (7)
2007 (6)
2008 (4)
2011 (2)
2006 (2)
2005 (2)

Lab affiliation

Department of Peptide-based Immunotherapy, Institute of Immunology, University and University Hospital Tübingen, Tübingen, Germany (2)
Chemistry, Michigan State University (1)
Clinical Collaboration Unit Translational Immunology, German Cancer Consortium (DKTK), Department of Internal Medicine, University Hospital Tübingen, Tübingen, Germany (1)
Department of Chemistry, Michigan State University, 578 S Shaw Lane, East Lansing, MI 48824, United States. (1)
Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON, Canada Department of Clinical Biochemistry, University Health Network, Toronto, ON, Canada Centre for Prognosis Studies in Rheumatic Diseases, Krembil Research Institute, Toronto Western Hospital, University Health Network, Toronto, ON, Canada Division of Rheumatology, Department of Medicine, University of Toronto, Toronto, ON, Canada, 11Institute of Medical Science, University of Toronto, Toronto, ON, Canada (1)
Department of Otorhinolaryngology and Head & Neck Surgery, University Medical Center Ulm, Head and Neck Cancer Center of the Comprehensive Cancer Center Ulm, Ulm, Germany (1)
Institut Pasteur - CNRS USR 2000 Mass Spectrometry for Biology Unit 28, rue du Dr. Roux 75 015 Paris (1)
Institute of Chemistry, Universidade Federal do Rio de Janeiro Av Athos da Silveira Ramos, 149, CT- A-542, Cidade Universitária 21941-909 Rio de Janeiro, RJ Brazil (1)
Mass Spectrometry for Biology Unit, Institut Pasteur, CNRS USR 2000, Paris, France (1)
Michigan State University (1)

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Immunopeptidomics-guided warehouse design for peptide-based immunotherapy in chronic lymphocytic leukemia

In recent years the clinical success of T cell-based immunotherapy approaches has revolutionized treatment of solid tumors and hematological malignancies. However, still some patients do not respond to available therapies at all, others for limited time only. A promising low side-effect approach is ...

ORGANISM(S): Homo sapiens (Human)

2021-09-10 | PXD024871 | Pride

Warehouse-based, immunopeptidome-guided design of personalised peptide vaccines shows feasibility in clinical trial evaluation in CLL patients

Cancer peptide vaccination represents a promising therapeutic approach, but has been hampered by lack of suitable antigens and restricted applicability due to different HLA backgrounds of individual patients. We here introduce a novel warehouse-based concept for composition of personalized peptide v...

ORGANISM(S): Homo sapiens (Human)

2024-11-08 | PXD054248 | Pride

Human Leukemia Vaccine Cll Warehouse Lc-ms/ms

Intelligent Warehouse in Industry 4.0-Systematic Literature Review.

Not available

S-EPMC10146052 | biostudies-literature

Optimizing in-store warehouse safety: A DEMATEL approach to comprehensive risk assessment.

Not available

S-EPMC11825006 | biostudies-literature

MitoMiner: a data warehouse for mitochondrial proteomics data.

Not available

S-EPMC3245170 | biostudies-literature