Weber J D JD - OmicsDI

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Unknown (181)
Proteomics (6)
Metabolomics (5)
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Genomics (1)

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Homo sapiens (5)
Mus musculus (2)
Saccharomyces cerevisiae (1)

Repository

MetaboLights (5)
pride (3)
biostudies-arrayexpress (2)
PanoramaPublic (2)
EGA (1)
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Tissue

Breast cancer cell (1)
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Disease

Breast cancer (1)

Technology Type

Mass spectrometry (5)
Mass Spectrometry (3)
NMR spectroscopy (2)
Bottom-up proteomics (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
Illumina HiSeq 2000 (1)
Orbitrap Fusion Lumos (1)
Bruker (1)
Gas Chromatography MS - positive (1)
LTQ FT Ultra (Thermo Scientific) (1)
LTQ FT-Ultra (Thermo Scientific) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2024 (3)
2026 (3)
2013 (2)
2020 (2)
2022 (1)
2017 (1)
2016 (1)

CHEBI ID

CHEBI:25017 (3)
CHEBI:78320 (3)
CHEBI:15428 (2)
CHEBI:15891 (2)
CHEBI:16027 (2)
CHEBI:16359 (2)
CHEBI:16449 (2)
CHEBI:16704 (2)
CHEBI:16755 (2)
CHEBI:17368 (2)
CHEBI:17568 (2)
CHEBI:17596 (2)
CHEBI:17750 (2)
CHEBI:17925 (2)
CHEBI:24898 (2)
CHEBI:25094 (2)
CHEBI:27266 (2)
CHEBI:27897 (2)
CHEBI:28834 (2)
CHEBI:29016 (2)
CHEBI:30831 (2)
CHEBI:6650 (2)
CHEBI:9349 (2)
CHEBI:10023 (1)
CHEBI:10028 (1)
CHEBI:10029 (1)
CHEBI:10037 (1)
CHEBI:10089 (1)
CHEBI:10095 (1)
CHEBI:10106 (1)

Metabolite Name

3-methylcrotonylglycine (2)
Inosine (2)
Uridine (2)
(+)-10-deoxymethynolide (1)
(+)-castanospermine (1)
(+)-syringaresinol (1)
(+/-)-abscisic acid (1)
(+/-)-camphor (1)
(+/-)-camphoric acid (1)
(+/-)12(13)-dihome (1)
(+/-)19(20)-dihdpa (1)
(+/-)8(9)-dihet ((8R,9R)-DHET) (1)
(+/-)9(10)-epome (1)
(+/-)9,10-dihydroxy-12z-octadecenoic acid (1)
(+/-)9-hpode (1)
(-)-andrographolide (1)
(10s)-juvenile hormone iii diol (1)
(11s,12e,14z)-11-hydroxy-12,14-icosadienoic acid (1)
(14r)-3beta,5,6beta,10,16-pentahydroxygrayanotoxan-14-yl acetate (1)
(17beta)-4-(acetylsulfanyl)-3-oxoandrost-4-en-17-yl propionate (1)
(1r,2r,6s,7s,8r,10s,11s,12r,16r,18r)-6,7-dihydroxy-8-(hydroxymethyl)-16-isopropenyl-4,18-dimethyl-14-nonyl-9,13,15,19-tetraoxahexacyclo[12.4.1.0~1,11~.0~2,6~.0~8,10~.0~12,16~]nonadec-3-en-5-one (1)
(1s,3z)-4-methylene-3-[(2e)-2-{(1r,3as,7ar)-7a-methyl-1-[(2r)-7,7,7-trifluoro-6-hydroxy-2-heptanyl]octahydro-4h-inden-4-ylidene}ethylidene]cyclohexanol (1)
(20z)-17-oxo-20-hexacosenoic acid (1)
(25s)-5beta-spirostan-3beta-yl beta-d-glucoside (1)
(2R,3S)-2,3-Dimethylmalate (1)
(2e)-3-[4-(sulfooxy)phenyl]acrylic acid (1)
(2e)-4-{3-[2-(2,4-dihydroxyphenyl)-2-oxoethyl]-4,6-dihydroxy-2-methoxyphenyl}-2-methyl-2-buten-1-yl hydrogen sulfate (1)
(2r)-2,3-dihydroxypropanoic acid (1)
(2r)-2-beta-gdimboa (1)
(2r)-3-{[(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(octanoyloxy)propyl octanoate (1)

Study type

Transcription profiling by array (1)
RNA-seq of coding RNA (1)

Release Date

2024 (29)
2021 (20)
2022 (17)
2025 (14)
2015 (13)
2018 (12)
2013 (10)
2026 (10)
2023 (10)
2017 (10)
2020 (8)
2011 (7)
2019 (4)
2012 (4)
2016 (3)
2014 (3)
2010 (3)
2009 (3)
2008 (2)
2006 (1)

Lab affiliation

Baylor College of Medicine (1)
Helmholtz diabetes center (1)
Weill Cornell Medicine, Department of Biochemistry 1300 York Avenue, Box #63 Room A-108 New York, NY 10065 (1)

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Sabotaging of the oxidative stress response by an oncogenic noncoding RNA.

Not available

S-EPMC5240659 | biostudies-literature

Longitudinal multi-omics reveals subset-specific mechanisms underlying irritable bowel syndrome

The gut microbiome has been implicated in multiple human chronic gastrointestinal (GI) disorders. Determining its mechanistic role in disease has been difficult due to apparent disconnects between animal and human studies and lack of an integrated multi-omics view of disease-specific physiologica...

2020-09-08 | MTBLS1396 | MetaboLights

Investigating the Mechanisms of Silver Nanoparticle Toxicity in Daphnia magna: A Multi-Omics Approach

Silver nanoparticles (AgNPs), one of the most common nanomaterials in use today, have been shown to enter the aquatic environment from use of commercially obtained products. Although acute toxicity has been shown in vitro and in vivo, there is still a great deal of uncertainty surrounding the molecu...

2017-05-08 | MTBLS260 | MetaboLights

Phosphorylation site mapping on purified mGluR8/arrestin complexes

phosphorylation sites of purified mGluR8 with arrestin are mapped by mass spectrometry.

ORGANISM(S): Homo sapiens (Human)

2026-08-22 | PXD055267 | Pride