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Transcriptomics (28)
Unknown (21)
Genomics (3)
Proteomics (2)
Metabolomics (2)
Genomic (1)

Organisms

Homo sapiens (9)
Mus musculus (7)
Arabidopsis thaliana (6)
Sus scrofa (4)
Picea engelmannii x Picea glauca (1)
Mycobacterium tuberculosis (1)
Oryctolagus cuniculus (1)
Bos taurus (1)

Repository

biostudies-arrayexpress (29)
EGA (2)
MassIVE (2)
MetaboLights (2)
dbGaP (1)

Technology Type

Mass spectrometry (2)
Illumina HumanOmni5 (1)
Illumina_670k - Illuminus, Affymetrix 6.0, Illumina 1.2M (1)

Instrument Platform

Illumina HiSeq 2500 (3)
Illumina NovaSeq 6000 (2)
10X Genomics Chromium (1)
NextSeq 500 (1)
Orbitrap Fusion Lumos (1)
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Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Q Exactive (1)

Publication Date

2014 (5)
2026 (4)
2021 (4)
2004 (4)
2025 (3)
2013 (3)
2022 (2)
2016 (2)
2015 (2)
2011 (1)
2010 (1)
2008 (1)
2024 (1)

CHEBI ID

CHEBI:17126 (2)
CHEBI:131439 (1)
CHEBI:132004 (1)
CHEBI:132007 (1)
CHEBI:132502 (1)
CHEBI:132539 (1)
CHEBI:132540 (1)
CHEBI:132543 (1)
CHEBI:132544 (1)
CHEBI:132591 (1)
CHEBI:132676 (1)
CHEBI:132677 (1)
CHEBI:132948 (1)
CHEBI:132983 (1)
CHEBI:132991 (1)
CHEBI:133005 (1)
CHEBI:133032 (1)
CHEBI:133046 (1)
CHEBI:133094 (1)
CHEBI:133139 (1)
CHEBI:133141 (1)
CHEBI:133144 (1)
CHEBI:133179 (1)
CHEBI:133185 (1)
CHEBI:133186 (1)
CHEBI:133197 (1)
CHEBI:133199 (1)
CHEBI:133432 (1)
CHEBI:133460 (1)
CHEBI:133532 (1)

Metabolite Name

(R)-3-hydroxybutyrylcarnitine (1)
1,3,7-trimethylurate (1)
1,3-dimethylurate (1)
1,7-dimethylurate (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPC (P-16:0/20:4)* (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPE (P-16:0/20:4)* (1)
1-(1-enyl-palmitoyl)-2-docosahexaenoyl-GPE (P-16:0/22:6)* (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPC (P-16:0/18:2)* (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPE (P-16:0/18:2)* (1)
1-(1-enyl-palmitoyl)-2-palmitoyl-GPC (P-16:0/16:0)* (1)
1-(1-enyl-palmitoyl)-GPE (P-16:0)* (1)
1-(1-enyl-stearoyl)-2-linoleoyl-GPE (P-18:0/18:2)* (1)
1-(1-enyl-stearoyl)-GPE (P-18:0)* (1)
1-docosahexaenoyl-GPE (22:6)* (1)
1-linoleoyl-2-arachidonoyl-GPC (18:2/20:4n6)* (1)
1-linoleoyl-GPC (18:2) (1)
1-linoleoyl-GPE (18:2)* (1)
1-linoleoyl-GPI (18:2)* (1)
1-margaroyl-2-linoleoyl-GPC (17:0/18:2)* (1)
1-methyl-4-imidazoleacetate (1)
1-methylhistidine (1)
1-methylnicotinamide (1)
1-methylurate (1)
1-myristoyl-2-palmitoyl-GPC (14:0/16:0) (1)
1-oleoyl-2-docosahexaenoyl-GPC (18:1/22:6)* (1)
1-oleoyl-2-linoleoyl-GPC (18:1/18:2)* (1)
1-oleoyl-2-linoleoyl-GPE (18:1/18:2)* (1)
1-palmitoyl-2-arachidonoyl-GPE (16:0/20:4)* (1)
1-palmitoyl-2-docosahexaenoyl-GPC (16:0/22:6) (1)
1-palmitoyl-2-docosahexaenoyl-GPE (16:0/22:6)* (1)

Study type

Transcription profiling by array (19)
RNA-seq of total RNA (2)
RNA-seq of coding RNA (2)
Animal - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
Genotyping by array (1)
ChIP-seq (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2013 (6)
2026 (5)
2014 (5)
2016 (4)
2011 (4)
2004 (4)
2025 (3)
2022 (3)
2021 (3)
2019 (3)
2015 (2)
2010 (2)
2023 (2)
2008 (1)
2024 (1)
2020 (1)
2018 (1)

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Effect of hepatocyte-restricted deletion of FGF21 on subcutaneous white adipose tissue gene expression in fasting mice

FGF21 is a liver-derived hormone. FGF21 expression and secretion from hepatocytes is potently induced in response to fasting. However, the significance of such fasting-induced hepatokine production is poorly understood. Here, we investigated the putative effect of hepatocyte-derived FGF21 on fasting...

ORGANISM(S): Mus musculus

2026-10-20 | E-MTAB-15880 | biostudies-arrayexpress

Effect of hepatocyte-restricted deletion of fgf21 deletion on perigonadic white adipose tissue gene expression in response to fasting in mice

FGF21 is a liver-derived hormone. It is potently induced and secreted in response to fasting. However, the biological significance of this endocrine response remains poorly understood. Here, we investigated the effect of hepatocyte FGF21 on perigonadic white adipose tissue biology through the analys...

ORGANISM(S): Mus musculus

2026-10-20 | E-MTAB-15878 | biostudies-arrayexpress

Variability in white blood cell counts in swine: identification of putative positional and functional candidate genes by a transcriptome-based study

The counts of total white blood cells (WBCs) and WBC subsets are well-established diagnostic factors for various diseases. It has been shown that variations in WBC counts are significantly controlled by individuals’ genetics in swine. However, despite detection of quantitative trait loci (QTLs) for ...

ORGANISM(S): Sus scrofa

2014-10-31 | E-GEOD-50589 | biostudies-arrayexpress

Quality of care for comorbid conditions during the transition to survivorship: differences between cancer survivors and noncancer controls.

Not available

S-EPMC3595422 | biostudies-literature

The Energy System Transformation Needed to Achieve the U.S. Long-Term Strategy.

Not available

S-EPMC9454374 | biostudies-literature

Comparison of the root transcriptome from plants grown on different growing substrates (hydroponics and soil).

In order to decipher the molecular alterations caused by the growing medium, we harvested the roots of plants grown in hydroponics and on soil for 6 weeks under 10-hour short days. The temperature was 20Â°C (day and night), the relative humidity was 70 %, and the light was provided by cool-white fl...

ORGANISM(S): Arabidopsis thaliana

2016-06-30 | E-MTAB-4129 | biostudies-arrayexpress

Stranded Total RNA-seq of liver biopsy collected from Holstein Friesian cows that were defined from cluster analysis as being metabolically "balanced", "imbalanced" or "other

Homeorhetic mechanisms assist dairy cows to transition from pregnancy to lactation. In some cows this is less successful and they develop severe negative energy balance, placing them at risk of metabolic and infectious disease and reduced fertility. We placed Holstein Friesian cows into metabolicall...

ORGANISM(S): Bos taurus

2021-07-09 | E-MTAB-9348 | biostudies-arrayexpress

Untargeted metabolomic analysis of human milk from healthy mothers reveals drivers of metabolite variability.

Understanding the human milk metabolome can help inform infant nutrition and health. Untargeted metabolomics was used to study breast milk from 31 healthy participants to assess the shared metabolites in milk from participants with various backgrounds and understand how different demographic, health...

2024-10-04 | MTBLS2419 | MetaboLights

An Advancement in Developmental and Reproductive Toxicity (DART) Risk Assessment: Evaluation of a Bioactivity and Exposure-Based NAM Toolbox

High throughput transcriptomics using the TempO-Seq (TM) platform for dose response modelling of 3 different cell lines treated with multiple compounds as part of a study to generate a toolbox and workflow for non-animal safety assessments. The data generated here was produced as one part of a toolb...

ORGANISM(S): Homo sapiens

2025-09-15 | E-MTAB-15274 | biostudies-arrayexpress

The peripheral blood transcriptome reflects variations in immunity traits in swine: toward identification of biomarkers

Immune traits (ITs) are potentially relevant criteria to characterize individualM-bM-^@M-^Ys immunocompetence. Thus, porcine ITs related to innate and adaptive immunity were studied by functional genomics approaches, with no initial focus on resistance to specific pathogens. Peripheral blood transcr...