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TranscriptomicsIdentification of genes essential for Moraxella catarrhalis growth under iron-limiting conditions using Genomic Array Footprinting (GAF): Expression analysis of directed gene deletion mutants.
Iron-sequestration by the human host is a first line defense against respiratory pathogens like Moraxella catarrhalis, which consequently experiences a period of iron-starvation during colonization and infection. We determined the genetic requirements for M. catarrhalis growth during iron-starvation...
ORGANISM(S): Moraxella catarrhalis BBH18 
2013-06-06 | E-GEOD-41547 | biostudies-arrayexpress
UnknownCloning and characterization of peter pan, a novel Drosophila gene required for larval growth.
Not available
S-EPMC25365 | biostudies-literature
ProteomicsSilveira_CYP26B1_BioID_P124_6600
Dataset description This dataset consists of 8 raw MS files and associated peak lists and results files, acquired on AB Sciex TripleTOF 6600 mass spectrometer operated in Data Dependent Acquisition mode. Samples were generated by Ema Dreseris. BioID and Mass spectrometry acquisition was performed ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-04-26 | MSV000091800 | MassIVE
TranscriptomicsExpression data from Pseudomonas aeruginosa (wild type and lasRrhlR mutant strains) exposed to human neutrophils
In the present in vitro study, interactions between P. aeruginosa (sessile biofilms as well as planktonic cells) and PMNs were analyzed by means of DNA microarray based transcriptomics. We found that the P. aeruginosa wild type biofilms, in contrast to planktonic cultures and quorum sensing (QS) def...
ORGANISM(S): Pseudomonas aeruginosa 
2009-08-04 | E-GEOD-6769 | biostudies-arrayexpress
ProteomicsConfident identification of citrullinated peptides from P gingivalis
Porphyromonas gingivalis is a key pathogen in the development of chronic periodontitis and has recently been linked to the development of rheumatoid arthritis and Alzheimer’s disease. In this project the outer membrane vesicles (OMV) from Pg have been analyzed using a two-dimensional HFBA-based sepa...
ORGANISM(S): Porphyromonas gingivalis (strain ATCC BAA-308 / W83) 
2019-11-22 | PXD015701 | Pride
Citrullination Citrulline Hfba Phorphyromonas gingivalis Proteins 
ProteomicsComparison of wild type and abc1k6-1 mutant total leaf extracts from 4 and 5 week old plants
The quantitative proteomes of leaf tissue from A. thaliana at 4 weeks and 5 weeks of growth using tandem mass spectrometry with label-free quantification. A comparison of three genotypes has been performed, namely i) the Col-0 wild type ecotype, ii) a T-DNA insertion mutant disrupting the plastoglob...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-03-02 | PXD030750 | Pride
Coq8 Abc1k6 Leaf 
ProteomicsQuantitative proteomics of isolated A. thaliana plastoglobules from wild-type, abc1k6-1 and Comp3
The quantitative proteomes of isolated plastoglobules have been determined from A. thaliana leaf chloroplasts at 4 weeks of growth using tandem mass spectrometry with label-free quantification. A comparison of three genotypes has been performed, namely i) the Col-0 wild type ecotype, ii) a T-DNA ins...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-03-02 | PXD030698 | Pride
Coq8 Plastoglobules Adck3 Abc1 
TranscriptomicstypeI_IFN
Systemic injection of salivary glands P. berghei ANKA GFP-sporozoites into IFNAR-/- mice or salivary glands extracts from non-infected mosquitoes into wild-type C57BL/6 mice. Data obtained were compared with part of hybridizations from experiment E-TABM-839
ORGANISM(S): Mus musculus 
2012-09-01 | E-MTAB-1145 | biostudies-arrayexpress
ModelsKallenberger2014 - CD95L induced apoptosis initiated by caspase-8, wild-type HeLa cells (cis/trans variant)
Kallenberger2014 - CD95L induced apoptosis initiated by caspase-8, wild-type HeLa cells (cis/trans variant) The paper describes a new approach that combines single cell and population data in the same model. The model consists of a large number of single cell models, which are fitt...
2024-09-02 | BIOMD0000000524 | BioModels
UnknownTP53 Status, Patient Sex, and the Immune Response as Determinants of Lung Cancer Patient Survival.
Not available
S-EPMC7352604 | biostudies-literature
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