Winkler D D - OmicsDI

OmicsDI

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Unknown (1154)
Transcriptomics (48)
Proteomics (23)
Genomics (10)
Genomic (1)
Metabolomics (1)
Multiomics (1)

Organisms

Homo sapiens (25)
Mus musculus (14)
Streptococcus pneumoniae (7)
Arabidopsis thaliana (6)
Saccharomyces cerevisiae (4)
Escherichia coli (2)
Danio rerio (2)
Methanospirillum hungatei JF-1 (2)
Methanothrix soehngenii GP6 (2)
Nitratidesulfovibrio vulgaris str. Hildenborough (2)
Ruminiclostridium cellulolyticum H10 (2)
Escherichia coli BW25113 (1)
Chlamydomonas reinhardtii (1)
Corynebacterium glutamicum ATCC 13032 (1)
Drosophila melanogaster (1)
Escherichia coli str. K-12 substr. W3110 (1)
Fagus sylvatica (1)
Mycobacterium tuberculosis (1)
Populus trichocarpa (1)
Rattus norvegicus (1)
Streptococcus pneumoniae D39 (1)
anaerobic digester metagenome (1)
soil metagenome (1)

Organisms

Heterohyrax brucei (3)
Mus musculus (3)

Repository

biostudies-arrayexpress (48)
pride (20)
ENA (6)
EGA (4)
MassIVE (2)
dbGaP (1)
MetaboLights (1)
PeptideAtlas (1)

Tissue

Cell culture (7)
Plant cell (3)
Permanent cell line cell (2)
Blood (1)
Brain (1)
Cardiac muscle cell (1)
Cerebrospinal fluid (1)
Heart (1)
Leaf (1)
Neuroblastoma cell (1)
Neuroblastoma cell line (1)
Seedling (1)
T cell (1)

Disease

Adenocarcinoma (1)
Acute leukemia (1)
Brain cancer (1)
Cardiovascular system disease (1)
Glioblastoma (1)
Heart failure (1)
Neuroblastoma (1)

Technology Type

Mass Spectrometry (20)
Shotgun proteomics (9)
Affinity purification coupled with mass spectrometry proteomics (6)
Bottom-up proteomics (2)
Data-dependent acquisition (2)
Mass spectrometry (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
Gel-based experiment (1)
Metaproteomics (1)
SRM/MRM (1)

Instrument Platform

Illumina NovaSeq 6000 (3)
Illumina HiSeq 2500 (2)
NextSeq 500 (2)
Illumina MiSeq (1)
Illumina HiSeq 1500 (1)
Orbitrap Eclipse (1)
Orbitrap Fusion Lumos (1)
Q Exactive (1)
Direct infusion MS - (1)
Gas Chromatography MS - (1)
LTQ Orbitrap (1)

Publication Date

2013 (10)
2021 (8)
2011 (6)
2010 (6)
2024 (5)
2023 (5)
2014 (5)
2017 (4)
2009 (4)
2020 (4)
2012 (3)
2026 (3)
2018 (2)
2015 (2)
2008 (2)
2005 (1)
2025 (1)
2019 (1)

CHEBI ID

CHEBI:132138 (1)
CHEBI:134538 (1)
CHEBI:134539 (1)
CHEBI:134543 (1)
CHEBI:134544 (1)
CHEBI:14314 (1)
CHEBI:15356 (1)
CHEBI:15428 (1)
CHEBI:15584 (1)
CHEBI:15674 (1)
CHEBI:15741 (1)
CHEBI:15940 (1)
CHEBI:16000 (1)
CHEBI:16010 (1)
CHEBI:16016 (1)
CHEBI:16040 (1)
CHEBI:16119 (1)
CHEBI:16168 (1)
CHEBI:16199 (1)
CHEBI:16265 (1)
CHEBI:16449 (1)
CHEBI:16551 (1)
CHEBI:16610 (1)
CHEBI:16708 (1)
CHEBI:16720 (1)
CHEBI:16811 (1)
CHEBI:16831 (1)
CHEBI:16958 (1)
CHEBI:17113 (1)
CHEBI:17148 (1)

Metabolite Name

1,3-Dihydroxyaceton (1)
Adenine (1)
Adenosine, 5-methylthio- (1)
Alanine (1)
Alanine, beta- (1)
Arabinose (1)
Arabitol (1)
Arginine (1)
Ascorbic acid (1)
Asparagine (1)
Aspartic acid (1)
Benzoic acid (1)
Benzoic acid, 2,5-dihydroxy- (1)
Butanoic acid, 2,4-dihydroxy- (1)
Butyric acid, 2,4-diamino-, DL- (1)
Butyric acid, 2-amino-, DL- (1)
Citric acid (1)
Cysteine (1)
Cysteine, N-acetyl- (1)
Cytosine (1)
Dehydroascorbic acid dimer (1)
Erythritol (1)
Erythronic acid (1)
Erythrose (1)
Ethanolamine (1)
Fructose (1)
Fumaric acid (1)
Galactinol (1)
Galactonic acid (1)
Galactosamine, N-acetyl- (1)

First Public Date

2023 (6)

Modification

15.994915 (1)
42.010565 (1)
58.005479 (1)

Study type

Transcription profiling by array (34)
RNA-seq of coding RNA (6)
RNA-seq of coding RNA from single cells (3)
Comparative genomic hybridization by array (2)
Unknown experiment type (1)
Plant - High-throughput sequencing (1)
Methylation profiling by array (1)

Release Date

2021 (131)
2022 (121)
2025 (101)
2024 (96)
2023 (94)
2018 (87)
2019 (80)
2020 (76)
2017 (62)
2016 (61)
2015 (55)
2014 (47)
2013 (38)
2011 (38)
2012 (24)
2026 (22)
2010 (19)
2009 (10)
2008 (9)
2005 (7)
2007 (5)
2006 (4)
2004 (4)
1999 (4)
2002 (2)
2001 (2)
2003 (1)
1998 (1)
1997 (1)

Lab affiliation

Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium (3)
Bioinformatic (1)
CPRO, Helmholtz-Zentrum für Infektionsforschung, Braunschweig, Germany (1)
Cardiovascular Division, King's College London, London, UK (1)
Department of Biology, Technion – Israel Institute of Technology, Haifa, Israel (1)
Department of Microbiology and Plant Biology School of Computer Science University of Oklahoma (1)
Department of Neurology and Neurooncology Program of the National Center for Tumor Diseases, Heidelberg University Hospital, Germany (1)
Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany (1)
Department of Radiation Oncology, Univerisity of Pennsylvania (1)
Heidelberg University Hospital, Department of Neurology (1)
Hochschule Anhalt Fachbereich 7 - Angewandte Biowissenschaften und Prozesstechnik (BWP) Bernburger Straße 55 06366 Köthen Germany (1)
Max Delbrueck Center, Berlin, Germany Berlin Institute of Health, Berlin, Germany (1)
Pediatric Hematology, Oncology and Hemostaseology, Hospital for Children and Adolescents, University Hospital of Frankfurt/Main, Goethe-University Frankfurt/Main, Frankfurt, Germany (1)
Quartier UNIL-Sorge Bâtiment Biophore Bureau : 2455 CH-1015 Lausanne (1)
Research Unit Environmental Simulation, Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, 85764 Neuherberg, Germany (1)
Schoole of biology, School of computer science, University of Oklahoma, US (1)
University of Oklahoma, Norman, OK, USA (1)
komm. Direktor for Innere Medizin mit Schwerpunktbezeichnung Hämatologie und internistische Onkologie, Universitätsmedizin Greifswald. (1)