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TranscriptomicsEucalyptWood
* In response to gravitational stresses, angiosperm trees form tension wood in the upper sides of branches and leaning stems in which cellulose content is higher, microfibrils are typically aligned closely with the fibre axis and the fibres often have a thick inner gelatinous cell wall layer (G-laye...
ORGANISM(S): Eucalyptus nitens 
2011-05-19 | E-GEOD-8816 | biostudies-arrayexpress
UnknownRepeated measures of decaying wood reveal the success and influence of fungal wood endophytes.
Not available
S-EPMC12455916 | biostudies-literature
TranscriptomicsGene expression of M. acetivorans producing ANME-1 Mcr during growth on methane vs. growth on methanol
Our goal is to convert methane efficiently into liquid fuels that may be more readily transported. Since aerobic oxidation of methane is less efficient, we focused on anaerobic processes to capture methane, which are accomplished by anaerobic methanotrophic archaea (ANME) in consortia. However, no p...
ORGANISM(S): Methanosarcina acetivorans 
2015-12-20 | E-GEOD-66445 | biostudies-arrayexpress
UnknownEvaluation of DNA Extraction Methods for Microbial Community Profiling in Deadwood Decomposition.
Not available
S-EPMC11561137 | biostudies-literature
ProteomicsA commercial antibody to the human condensin II subunit NCAPH2 cross-reacts with a SWI/SNF complex component
Condensin complexes compact and disentangle chromosomes in preparation for cell division. Commercially available antibodies raised against condensin subunits have been widely used to characterise their cellular interactome. Here we have assessed the specificity of a polyclonal antibody (Bethyl A302-...
ORGANISM(S): Mus musculus (Mouse) 
2020-12-14 | PXD022664 | Pride
Swi/snf Condensin Antibody Ncaph2 Cross-react 
TranscriptomicsTempo-Seq experiment relating to Next Generation Risk Assessment for Occupational Chemical Safety – a Real World Example with Sodium-2-hydroxyethane sulfonate
A dose response and human cell line comparison of transcriptional responses following treatment with the chemical compound Sodium-2-hydroxyethane sulfonate. Gene expression changes were used to estimate the POD - minimum effect concentration when a biological perturbation as estimated by gene exp...
ORGANISM(S): Homo sapiens 
2024-12-31 | E-MTAB-14069 | biostudies-arrayexpress
UnknownSocial determinants of health as a framework to identify and assess cross-sector funding opportunities.
Not available
S-EPMC10796285 | biostudies-literature
ProteomicsRapid and specific degradation of endogenous proteins in mouse models using auxin-inducible degrons
Auxin-inducible degrons are a chemical genetic tool for targeted protein degradation and are widely used to study protein function in cultured mammalian cells. Here, we develop CRISPR-engineered mouse lines that enable rapid and highly specific degradation of tagged endogenous proteins in vivo. Most...
ORGANISM(S): Mus musculus (Mouse) 
2022-06-07 | PXD032374 | Pride
Dia Condensin Auxin degradation 
TranscriptomicsHost-based markers for the early stage of infection by the grapevine trunk pathogen Neofusicoccum parvum
In the vineyard, symptoms of the grapevine trunk disease Botryosphaeria dieback do not appear until 1 or 2 years after the causal fungus Neofusicoccum parvum establishes a necrotic canker in the permanent woody structure of the vine. There are preventative management practices, but growers tend to ...
ORGANISM(S): Vitis vinifera 
2015-03-24 | E-GEOD-58653 | biostudies-arrayexpress
TranscriptomicsMethanol and Methylamine Utilization Pathways in Methyloversatilis universalis FAM5: Genome Wide Gene Expression and Mutagenesis Studies
Methyloversatilis universalis FAM5 utilizes single carbon compounds such as methanol or methylated amines as a sole source of carbon and energy. Expression profiling reveals distinct sets of genes altered during growth on methanol vs methylamine. Growth on methanol results in activation of mdh2 and ...
ORGANISM(S): Methyloversatilis universalis FAM5 
2014-12-04 | E-GEOD-63822 | biostudies-arrayexpress
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