Sort   by:  
 Page size 
ProteomicsQuantitative analysis of global crotonylome of RAW264.7 cells treated by butyrate based on TMT markers
The expression of lysozyme was significantly up-regulated in macrophages treated with butyrate. In order to prove the relationship between Lysine Crotonylation modification and lysozyme up-regulation, lysine sites occured croton modification were detected and analyzed.
ORGANISM(S): Mus musculus (Mouse) 
2025-06-16 | PXD029698 | Pride
Butyrate Raw264.7 Macrophages Global crotonylome 
ProteomicsThe influence of different Matrigel dissolving methods on proteome research of human derived organoids
Here we investigated the influence of different Matrigel dissolving methods on organoid proteomics.
ORGANISM(S): Homo Sapiens Mus Musculus 
PXD029173 |
TranscriptomicsThe rsa1-1 mutation affects global gene expression in Arabidopsis thaliana with or without salt stress
Salt stress is one of the most severe environmental conditions which cause huge losses in crop production worldwide. We identified a novel calcium-binding protein and used the Affymetrix whole-genome arrays to define downstream targets of this important protein. We used the microarrays to reveal the...
ORGANISM(S): Arabidopsis thaliana 
2013-07-07 | E-GEOD-39236 | biostudies-arrayexpress
TranscriptomicsGenome-wide maps of AGO1-bound small RNA in Arabidopsis leaves
We report flg22 regulate the accumulation of AGO1-bound small RNA in arabidopsis. We find that a number of miRNAs are up- or down-regulated by flg22, a well-studied PAMP. Examination of AGO1-bound small RNAs with or without flg22 treatment.
ORGANISM(S): Arabidopsis thaliana 
2010-02-25 | E-GEOD-20448 | biostudies-arrayexpress
TranscriptomicsThe rcf1-1 mutation affects global gene expression in Arabidopsis thaliana with or without cold stress.
Cold stress is one of the most severe environmental conditions which cause huge losses in crop production worldwide. We identified an essential regulator of cold-responsive genes and used the Affymetrix whole-genome arrays to define downstream targets of this important protein. We used the microarra...
ORGANISM(S): Arabidopsis thaliana 
2013-02-25 | E-GEOD-39090 | biostudies-arrayexpress
TranscriptomicsGenome-wide identification of mis-spliced/intron-retained transcripts in Arabidopsis thaliana rcf1-1 mutant plants under normal growth conditions as determined by tiling array analysis.
Cold stress is one of the most severe environmental conditions which cause huge losses in crop production worldwide. We identified a DEAD box RNA helicase, RCF1 (Regulator of CBF gene expression 1) that controls pre-mRNA splicing of cold-stress-responsive genes including positive and negative regula...
ORGANISM(S): Arabidopsis thaliana 
2013-02-25 | E-GEOD-41377 | biostudies-arrayexpress
TranscriptomicsGenome-wide identification of mis-spliced/intron-retained transcripts in Arabidopsis thaliana rcf1-1 mutant plants under cold stress as determined by tiling array analysis.
Cold stress is one of the most severe environmental conditions which cause huge losses in crop production worldwide. We identified a DEAD box RNA helicase, RCF1 (Regulator of CBF gene expression 1) that controls pre-mRNA splicing of cold-stress-responsive genes including positive and negative regula...
ORGANISM(S): Arabidopsis thaliana 
2013-02-25 | E-GEOD-41378 | biostudies-arrayexpress
GenomicsGenome-wide maps of H3K27me3 in WT (wild type) and Epi-df (mutant) rice
DNA methylation and histone H3 lysine 9 dimethylation (H3K9me2) are important epigenetic repression marks for silencing transposons in heterochromatin and regulating gene expression in plant development. However, the mechanistic relationship to other repressive marks, such as histone H3 lysine 27 tr...
ORGANISM(S): Oryza sativa 
2013-12-04 | E-GEOD-40674 | biostudies-arrayexpress
TranscriptomicsPancreas-specific Sirt1-deficiency in mice compromises beta-cell function without development of hyperglycemia
Sirtuin 1 (Sirt1) has been reported to be a critical positive regulator of glucose-stimulated insulin secretion in pancreatic beta-cells. The effects on islet cells and blood glucose levels when Sirt1 is deleted specifically in the pancreas are still unclear.This study examined islet glucose respons...
ORGANISM(S): Mus musculus 
2016-03-01 | E-GEOD-67239 | biostudies-arrayexpress
TranscriptomicsComparison of transcriptome profile between wild-type and Epi-df mutant plants
We identified and characterized a rice epigenetic mutant Epi-df which exhibits a dwarf stature and various floral defects that are inherited in a dominant fashion. We demonstrated that Epi-df participates in Polycomb repressive complex 2 (PRC2) mediated gene silencing. Epigenetic mutations results i...
ORGANISM(S): Oryza sativa Japonica Group 
2012-07-12 | E-GEOD-39298 | biostudies-arrayexpress
Sort   by:  
 Page size