Xiao Wenqing W - OmicsDI

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Unknown (1)
Metabolomics (1)
Proteomics (1)

Organisms

Saccharomyces cerevisiae (1)

Repository

MetaboLights (1)
pride (1)

Tissue

Cell culture (1)

Technology Type

Mass spectrometry (1)
Mass Spectrometry (1)
Shotgun proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2022 (1)
2018 (1)

CHEBI ID

CHEBI:10037 (1)
CHEBI:107634 (1)
CHEBI:132789 (1)
CHEBI:132793 (1)
CHEBI:137496 (1)
CHEBI:139030 (1)
CHEBI:139445 (1)
CHEBI:139469 (1)
CHEBI:141136 (1)
CHEBI:143235 (1)
CHEBI:143245 (1)
CHEBI:145096 (1)
CHEBI:15560 (1)
CHEBI:15604 (1)
CHEBI:15640 (1)
CHEBI:15702 (1)
CHEBI:15741 (1)
CHEBI:15756 (1)
CHEBI:157745 (1)
CHEBI:15793 (1)
CHEBI:15843 (1)
CHEBI:15864 (1)
CHEBI:16119 (1)
CHEBI:16259 (1)
CHEBI:16335 (1)
CHEBI:16424 (1)
CHEBI:165323 (1)
CHEBI:165324 (1)
CHEBI:165340 (1)
CHEBI:165341 (1)

Metabolite Name

(+)-Pinoresinol (1)
(+/-)12(13)-dihome (1)
(+/-)9(10)-epome (1)
(+/-)9,10-dihydroxy-12z-octadecenoic acid (1)
(+/-)9-hpode (1)
(15z)-9,12,13-trihydroxy-15-octadecenoic acid (1)
(1S,2S,8xi,9beta,16alpha,17xi)-1-(beta-D-Glucopyranosyloxy)-2,16,20-trihydroxy-9,10,14-trimethyl-11,22-dioxo-4,9-cyclo-9,10-secocholest-5-en-25-yl acetate (1)
(2e)-3-(acetoxymethyl)-5-[(1s,4ar,8ar)-2-(hydroxymethyl)-5,5,8a-trimethyl-1,4,4a,5,6,7,8,8a-octahydro-1-naphthalenyl]-2-pentenoic acid (1)
(2e)-3-[4-({2-o-[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)tetrahydro-2-furanyl]-beta-d-glucopyranosyl}oxy)-3-methoxyphenyl]acrylic acid (1)
(3R)-beta-Leucine (1)
(3beta,9xi)-3,14-Dihydroxycarda-5,20(22)-dienolide (1)
(3r,4r,6r)-n-allyl-6-{[4-(3-hydroxyphenyl)-1h-1,2,3-triazol-1-yl]methyl}-n-methylquinuclidine-3-carboxamide (1)
(3r,4s)-4,6,8-trihydroxy-7-methoxy-3-methyl-3,4-dihydro-1h-isochromen-1-one (1)
(3r,4s,6r)-n-(2-methoxybenzyl)-6-{[4-(2-pyridinyl)-1h-1,2,3-triazol-1-yl]methyl}quinuclidine-3-carboxamide (1)
(3r,5r)-1,3,5-trihydroxy-4-{[(2e)-3-(4-hydroxy-3-methoxyphenyl)-2-propenoyl]oxy}cyclohexanecarboxylic acid (1)
(5xi,9xi)-17-Hydroxykaur-15-en-19-oic acid (1)
1,4:3,6-dianhydro-2,5-dideoxy-2-{[4-(3-fluorophenyl)-2-pyrimidinyl]amino}-5-[(methoxyacetyl)amino]-l-iditol (1)
1-(3-cyanophenyl)-3-{[(2r,4s,5r)-5-(3-cyclohexyl-1-methyl-1h-pyrazol-5-yl)-1-azabicyclo[2.2.2]oct-2-yl]methyl}urea (1)
1-(4,7-dimethylpyrazolo[5,1-c][1,2,4]triazin-3-yl)ethan-1-one (1)
1-(4-methoxyphenyl)-3-{[(2r,4s,5s)-5-(4-thiomorpholinylmethyl)-1-azabicyclo[2.2.2]oct-2-yl]methyl}urea (1)
1-({(1s,4s,6s)-6-isopropyl-3-methyl-4-[2-(4-methyl-1-piperazinyl)-2-oxoethyl]-2-cyclohexen-1-yl}methyl)-3-(3-methoxyphenyl)urea (1)
1-[1-({(3r,4s)-3-[(5-butyl-1,2-oxazol-3-yl)methyl]-4-piperidinyl}acetyl)-4-piperidinyl]-1,3-dihydro-2h-benzimidazol-2-one (1)
1-dodecanesulfonic acid (1)
12-epileukotriene b4 (1)
12-hydroxydodecanoic acid (1)
12-oxo phytodienoic acid (1)
13(s)-hotre (1)
13,14-dihydro-15-keto prostaglandin a2 (1)
13-HOPT (13(s)-hpotre) (1)
16,17-dihydroxykauran-18-oic acid (1)

Release Date

2017 (1)

Lab affiliation

Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences (1)

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Proteome-wide identification of SAPs in an industrial yeast strain

Most proteogenomic approaches for mapping single amino acid polymorphisms (SAPs) require construction of a sample-specific database containing protein variants predicted from the next-generation sequencing (NGS) data. We present a new strategy for direct SAP detection without relying on NGS data. Am...

ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast)

2018-04-18 | PXD003101 | Pride

Industrial yeast strain Proteogenomics Sap

The genome draft of coconut (Cocos nucifera).

Not available

S-EPMC5714197 | biostudies-literature

Plant elicitor peptide signalling confers rice resistance to piercing-sucking insect herbivores and pathogens

Rice is a staple food crop worldwide, and its production is severely threatened by phloem-feeding insect herbivores, particularly the brown planthopper (BPH, Nilaparvata lugens), and destructive pathogens. Despite the identification of many BPH resistance genes, the molecular basis of rice resistanc...

2022-02-23 | MTBLS3518 | MetaboLights

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