Xu Haibo H - OmicsDI

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Unknown (4)
Proteomics (3)
Transcriptomics (1)
Metabolomics (1)

Organisms

Homo sapiens (2)
Arabidopsis thaliana (1)
Staphylococcus aureus (1)

Repository

pride (2)
biostudies-arrayexpress (1)
iProX (1)
MetaboLights (1)

Technology Type

Gel-based experiment (2)
Mass Spectrometry (2)
Mass spectrometry assay (1)

Instrument Platform

Illumina HiSeq 2500 (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2021 (3)
2024 (1)
2023 (1)

Metabolite Name

(+)-Abscisic Acid (1)
(-)-Abscisic acid (1)
(1R,2R,4R,5S)-(+)-p-Menthane-2,5-diol (1)
(1R,4E,5'R,6R,6'R,7S,8S,10S,11S,12R,14S,15R,16S,18E,20E,22S,25R,27S,29S)-22-Ethyl-7,11,14,15-tetrahydroxy-6'-(2-hydroxypropyl)-5',6,8,10,12,14,16,29-octamethylspiro[2,26-dioxabicyclo[23.3.1]nonacosa-4,18,20-triene-27,2'-oxane]-3,9,13-trione (1)
(2R,3Z)-Phycocyanobilin (1)
(3R,4R)-3-Amino-1-hydroxy-4-methylpyrrolidin-2-one (1)
(3S)-3,6-Diaminohexanoate (1)
(3Z,6Z)-3,6-Nonadienal (1)
(4-methoxy-1-oxa-9-azaspiro[5.5]undecan-9-yl)-(3-methylthiophen-2-yl)methanone (1)
(5alpha,8beta,9beta)-5,9-Epoxy-3,6-megastigmadien-8-ol (1)
(8R,9S,13S,14S)-3-Hydroxy-13-methyl-4,6,7,8,9,11,12,14,15,16-decahydro-3H-cyclopenta[a]phenanthren-17-one (1)
(E)-2-(2,4-Hexadiynylidene)-1,6-dioxaspiro[4.5]dec-3-ene (1)
(E,E)-2,4-Hexadienal (1)
(R)-1-Octen-3-ol (1)
(R)-Boschniakine (1)
(R)-Piperitone (1)
(R)-Sulcatol (1)
(S)-2,3,4,5-tetrahydrodipicolinate (1)
(S)-7-(3-Amino-1-pyrrolidinyl)-1-cyclopropyl-6-fluoro-1,4-dihydro-4-oxo-1,8-naphthyridine-3-carboxylic acid (1)
(S)-Equol (1)
(S)-Nerolidol 3-O-[a-L-Rhamnopyranosyl-(1->4)-a-L-rhamnopyranosyl-(1->2)-[a-L-rhamnopyranosyl-(1->6)]-b-D-glucopyranoside] (1)
1,17-Heptadecanediol (1)
1,2-Dihexanoyl-sn-glycero-3-phosphoethanolamine (1)
1,2-Dihydronaphthalene-1,2-diol (1)
1,6-anhydro-N-acetyl-beta-muramate (1)
1-(2-Furanyl)-1-butanone (1)
1-(2-Hydroxyethoxy)methyl-5-methyluracil (1)
1-(3-Pyridinyl)-1,4-butanediol (1)
1-(Hydroxymethyl)-5,5-dimethyl-2,4-imidazolidinedione (1)
1-Cyclohexene-1-carboxylic acid (1)

Study type

RNA-seq of coding RNA (1)

Release Date

2021 (1)
2024 (1)
2023 (1)
2022 (1)
2019 (1)

Lab affiliation

Department of Chemistry, The University of Hong Kong (2)

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RNA-seq of WT and dja6 dja5 mutant in Arabidopsis thaliana

Total RNA was extracted from 3-week-old WT and dja6 dja5 seedlings grown on MS medium. RNA sequencing libraries were constructed and subjected to sequencing using an Illumina Hiseq 2500 platform. After a quality control, the gene expression profiling analysis was performed based on the number of tag...

ORGANISM(S): Arabidopsis thaliana

2021-03-15 | E-MTAB-9575 | biostudies-arrayexpress

Silver binding proteins in S. aureus

The rapid emergence of drug resistant Staphylococcus aureus (S. aureus), in particular, methicillin-resistant S. aureus (MRSA) poses a serious threat to public health globally. Reuse of metal-based antimicrobials stands for one of the most promising strategies to resensitize drug resistant bacteria ...

ORGANISM(S): Staphylococcus aureus

2021-09-10 | PXD025106 | Pride

Silver-binding protein S. aureus

First identification of Cr-binding proteome in human HepG2 cells

By integrating fluorescence imaging with proteomic approach, we visualized Cr3+ protein targets mainly localized in mitochondria and identified eight Cr3+-binding proteins, including ATP synthase catalytic subunit beta (ATP5B).

ORGANISM(S): Homo sapiens (Human)

2023-05-10 | PXD027305 | Pride

Chromium Hepg2

Genetic and Phenotype Analysis of a Chinese Cohort of Infants and Children With Epilepsy.

Not available

S-EPMC9091957 | biostudies-literature

Strong optical response and light emission from a monolayer molecular crystal.

Not available

S-EPMC6897925 | biostudies-literature

Extracellular Vesicles from probiotics mediated Walnut green husk polysaccharide alleviates ochratoxin-A-induced cognitive impairment via SCFA and 5-HT mediated microbiota-gut-brain axis

BACKGROUND: Ochratoxin A (OTA) have made it a serious hazard to food safety worldwide that poses a serious health risk to humans. Our previous research showed that Walnut green husk polysaccharides (WGP) can effectively alleviate intestinal inflammation and intestinal microbiota ...

2024-10-10 | MTBLS10673 | MetaboLights

Proteomics dataset of COVID-19 and control patients

ORGANISM(S): Homo Sapiens

2021-10-14 | PXD029023 |

Epidemiology and outcomes of hospital-acquired bloodstream infections in intensive care unit patients: the EUROBACT-2 international cohort study.

Not available

S-EPMC9916499 | biostudies-literature

Presentation, management, and outcomes of older compared to younger adults with hospital-acquired bloodstream infections in the intensive care unit: a multicenter cohort study.

Not available

S-EPMC11621140 | biostudies-literature