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TranscriptomicsGenome-Wide Yan Chromatin Occupancy in Drosophila Embryos
The ETS transcriptional repressor Yan functions as part of a developmental switch that in response to receptor tyrosine kinase signaling, transitions from a high-Yan to a low-Yan state to direct specification of a variety of cell fates. To date very few direct target genes have been identified, nor ...
ORGANISM(S): Drosophila melanogaster 
2013-03-01 | E-GEOD-34038 | biostudies-arrayexpress
GenomicsGenome-wide maps of Yan chromatin association
High-resolution genome-wide binding of Yan used to confirm the presence of high-density regions seen in ChIP-chip ChIP-Seq of Yan protein in stage 11 Drosophila embryos
ORGANISM(S): Drosophila melanogaster 
2013-03-01 | E-GEOD-34040 | biostudies-arrayexpress
MetabolomicsDifferential role of sphingomyelin in influenza virus, rhinovirus and SARS-CoV-2 infection of Calu-3 cells
Host cell lipids play a pivotal role in the pathogenesis of respiratory virus infection. However, a direct comparison of the lipidomic profile of influenza virus and rhinovirus infections is lacking. In this study, we first compared the lipid profile of influenza virus and rhinovirus infection in a ...
2022-11-15 | MTBLS2352 | MetaboLights
TranscriptomicsExpression profiling of P. stutzeri A1501 treated with 20mM ammonia shock for 10 min
A whole genome DNA microarray was used to undertake a global transcriptional analysis of nitrogen fixation and ammonium repression in Pseudomonas stutzeri A1501. The aim of this study was to identify the genes that are up-regulated under nitrogen fixation conditions and rapidly down-regulated as soo...
ORGANISM(S): Pseudomonas stutzeri A1501 
2010-05-14 | E-GEOD-14775 | biostudies-arrayexpress
UnknownGenomic Functional Analysis and Cellulase Characterization for the Enzyme-Producing Strain <i>Bacillus subtilis</i> Y4X3 Isolated from Saline-Alkaline Soil in Xinjiang, China.
Not available
S-EPMC11944486 | biostudies-literature
MetabolomicsMetabolome and transcriptome combined profiling reveals fluconazole resistance mechanisms of Trichosporon asahii and role of farnesol in fluconazole tolerance

Trichosporon asahii is a basidiomycete yeast that is pathogenic to humans and animals, and fluconazole-resistant strains have recently increased. Farnesol secreted by fungi is a factor that causes variations in fluconazole resistance; however, few studies have explored the underlying mec...

2023-11-20 | MTBLS7236 | MetaboLights
UnknownMechanical Behavior of Human Cancellous Bone in Alveolar Bone under Uniaxial Compression and Creep Tests.
Not available
S-EPMC9457185 | biostudies-literature
ProteomicsProteomics analysis of mycobacterium marinum culture filtrate
Mycobacterium marinum is a pathogenic bacterium that causes infections in both fish and humans. The PE/PPE protein family is unique to mycobacteria and has been implicated in various aspects of mycobacterial pathogenicity. Understanding the presence and potential function of these proteins in M. mar...
ORGANISM(S): Mycobacterium marinum (strain ATCC BAA-535 / M) 
2025-05-13 | PXD050612 | Pride
Mycobacterium marinum Lc-ms Culture filtrate 
Proteomicshuman Bora-interacting proteins
Mass spectrometry analysis of proteins associated with immunopurified Flag-Bora.
ORGANISM(S): Homo sapiens (Human) 
2025-09-08 | PXD066562 | Pride
Interaction Bora 
GenomicIdentifying Novel Small RNA Biomarkers for Patients with Gastric Cancer

The biomarker development study consisted of two parts: discovery and validation. The first part was the discovery and verification phase of biomarkers using two different platforms: transcriptomic and miRNA. The salivary transcriptomes of 63 GC samples and 31 non-GC controls were profiled using ...

phs001767 | dbGaP
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