Ye Cheng C - OmicsDI

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Unknown (837)
Proteomics (44)
Metabolomics (11)
Transcriptomics (9)
Genomics (3)

Organisms

Schizosaccharomyces pombe (27)
Oryza sativa Indica Group (27)
Sinorhizobium meliloti BL225C (27)
Sus scrofa domesticus (27)
Ostreococcus tauri (27)
Saccharomyces cerevisiae (27)
Staphylococcus aureus (27)
Rattus norvegicus (27)
Escherichia coli (27)
Candida albicans (27)
Cyanophora paradoxa (27)
Entamoeba histolytica (27)
Physcomitrium patens (27)
Methylohalobius crimeensis 10Ki (27)
Homo sapiens (27)
Lotus japonicus (27)
Marchantia polymorpha (27)
Shigella flexneri (27)
Ctenopharyngodon idella (27)
Danio rerio (27)
Allexis (27)
Shigella (27)
Homo sapiens (15)
Mus musculus (6)
Ovis aries (3)
Severe acute respiratory syndrome coronavirus 2 (2)
Bombyx mori (1)
Oryza sativa Japonica Group (1)
Rattus norvegicus (1)
Mus sp. (1)

Repository

pride (27)
biostudies-arrayexpress (13)
iProX (13)
MetaboLights (11)
PeptideAtlas (3)
PAXDB (1)

Tissue

Whole body (4)
Cell culture (4)
Epithelial cell (3)
Others (2)
Blood (2)
Brain (1)
Stomach lumen (1)
HuH-7 cell (1)
Nasal mucosa (1)
HEK-293 cell (1)
Stomach (1)
Oocyte (1)
Macrophage (1)
Brain (1)
Cell suspension culture (1)
Leaf (1)
Erythrocyte (1)
Liver (1)
Colon (1)

Disease

Acute leukemia (2)
Adenocarcinoma (1)
Severe acute respiratory syndrome (1)
Stomach carcinoma (1)
Malignant neoplasm of ovary (1)
COVID-19 (1)
Breast cancer (1)

Technology Type

Mass Spectrometry (27)
Shotgun proteomics (11)
Mass spectrometry (10)
Bottom-up proteomics (6)
Top-down proteomics (4)
Data-dependent acquisition (3)
Affinity purification coupled with mass spectrometry proteomics (3)
NMR spectroscopy (2)
Gel-based experiment (2)
Immunopeptidomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - negative - reverse phase (5)
Gas Chromatography MS - (2)
Nuclear Magnetic Resonance (NMR) - (2)
Liquid Chromatography MS - positive - hilic (2)
LTQ Orbitrap XL (2)
GenePix 4000B [Axon Instruments] (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
MS Imaging - (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
LTQ Orbitrap (1)

Publication Date

2023 (12)
2021 (9)
2025 (8)
2024 (5)
2026 (5)
2014 (4)
2015 (3)
2013 (3)
2012 (3)
2022 (3)
2017 (3)
2019 (2)
2016 (1)
2011 (1)
2010 (1)
2007 (1)

UNIPROT ID/AC

M1B545_SOLTU (1)
M1AZD7_SOLTU (1)
M1BW10_SOLTU (1)
M1B8M2_SOLTU (1)
M1AYE0_SOLTU (1)
M0ZS50_SOLTU (1)
M1CQY1_SOLTU (1)
M1A5P7_SOLTU (1)
M0ZMC5_SOLTU (1)
M1ARW6_SOLTU (1)
M1D2H3_SOLTU (1)
M1BCB6_SOLTU (1)
M1C3E9_SOLTU (1)
M1A2Y2_SOLTU (1)
M1AXS6_SOLTU (1)
M1B6U8_SOLTU (1)
NDHJ_SOLTU (1)
M1AFH0_SOLTU (1)
M1A301_SOLTU (1)
M1C6M4_SOLTU (1)
M1C3L2_SOLTU (1)
M1CDG3_SOLTU (1)
M1D1S1_SOLTU (1)
M1D5Z7_SOLTU (1)
M1AM96_SOLTU (1)
M1E1A4_SOLTU (1)
M1BBZ5_SOLTU (1)
M0ZVJ8_SOLTU (1)
M1AP74_SOLTU (1)
M1ADS6_SOLTU (1)

ENSEMBL ID

ENSG00000147251 (1)
ENSG00000229353 (1)
ENSG00000170477 (1)

CHEBI ID

CHEBI:16449 (5)
CHEBI:28044 (4)
CHEBI:18186 (4)
CHEBI:24813 (3)
CHEBI:27732 (3)
CHEBI:16411 (3)
CHEBI:30805 (3)
CHEBI:28177 (3)
CHEBI:27823 (3)
CHEBI:48131 (3)
CHEBI:15729 (3)
CHEBI:16467 (3)
CHEBI:17351 (3)
CHEBI:9300 (3)
CHEBI:17405 (3)
CHEBI:15891 (3)
CHEBI:17802 (3)
CHEBI:7916 (3)
CHEBI:17509 (3)
CHEBI:28683 (3)
CHEBI:30769 (3)
CHEBI:17126 (3)
CHEBI:17750 (3)
CHEBI:73024 (3)
CHEBI:16797 (3)
CHEBI:16020 (3)
CHEBI:16704 (3)
CHEBI:16040 (3)
CHEBI:17596 (3)
CHEBI:16335 (3)

Metabolite Name

Leucine (3)
Betaine (3)
Proline (3)
Cytosine (3)
Adenosine (3)
Hypoxanthine (3)
Creatinine (3)
Cysteine (2)
Glutarylcarnitine (2)
Valine (2)
Epinephrine (2)
Trimethylamine N-oxide (2)
1-Methylnicotinamide (2)
Trigonelline (2)
Propionylcarnitine (2)
Nicotinuric acid (2)
7-Methylguanine (2)
L-Ornithine (2)
Pantothenic acid (2)
Palmitoleic acid (2)
Decanoylcarnitine (2)
Cotinine (2)
Methionine (2)
Bilirubin (2)
Theophylline (2)
Laudanosine (2)
Lysine (2)
Pipecolic acid (2)
Tyrosine (2)
Serine (2)

Study type

RNA-seq of coding RNA (6)
ChIP-seq (2)
Transcription profiling by array (2)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (133)
2023 (108)
2022 (106)
2020 (89)
2024 (87)
2021 (86)
2019 (39)
2018 (38)
2015 (30)
2026 (23)
2014 (22)
2017 (21)
2016 (20)
2013 (17)
2012 (8)
2011 (5)
2010 (5)
2009 (5)
2007 (3)
2008 (2)
2005 (2)
2004 (1)

Lab affiliation

Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Harbin 150040, China (2)
1Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
Institute of Bioengineering, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, Zhejiang 310027, China (1)
Hu Bei province,enshi Acandemy of Agricutural sciences (1)
Institute of Proteomics and Molecular Enzymology, School of Life Sciences, Zhejiang Sci-Tech University (1)
Laboratory of Molecular Oncology, Frontiers Science Center for Disease-related Molecular Network, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, Sichuan University, Chengdu 610041, China. (1)
Zhejiang University, Hangzhou 310006 Zhejiang, China (1)
Soochow university, China (1)
Zhejiang Provincial People’s Hospital (1)
Department of Pathology and Cell Biology, Columbia University Medical Center, New York, NY, USA (1)
Department of General Surgery, Key Laboratory of Hepatosplenic Surgery, Ministry of Education, The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
1 Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China. 2 Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. 3 Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
1 Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, PR China 2 Department of Microbiology and Immunology, Tongji University School of Medicine, Shanghai 200049, PR China 3 Clinical Translation Research Center, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, China. (1)
The Hong Kong University of Science and Technology (1)
Structural Biology (1)
Department of Gastrointestinal Surgery, Zhongshan Hospital of Xiamen University, School of Medicine, Xiamen (1)
Department of Biochemistry and Molecular Biology, Health Science Center, Ningbo University, Fenghua Road No.818, Ningbo, 315211, China. (1)
School of Biomedical Sciences, The University of Hong Kong (1)
Department of Dermatology, Xinhua Hospital, Shanghai Jiaotong University School of Medicine, Shanghai, China (1)
Department of Chemical and Biological Engineering, The Hong Kong University of Science and Technology (HKUST) (1)
College of Pharmacy, Anhui University of Chinese Medicine, Hefei 230012, China (1)
Baxter Laboratory for Stem Cell Biology Department of Microbiology & Immunology Stanford University School of Medicine 269 Campus Drive Stanford, CA 94305-5175, USA (1)
Department of Molecular Immunology, Institute of Basic Medical Sciences (1)
Institute of Bioengineering, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, Zhejiang 310027, China (lab head) (1)
Jinan University (1)

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Effect of high-voltage electrostatic field salting on the quality of salt-reduced Yi ye Cheng golden pomfret.

Not available

S-EPMC11851181 | biostudies-literature

TMT analysis of phosphorylated proteomics of human osteosarcoma cell 143B treated with BEA

Phosphorylated proteomics was used to detect the changes of phosphotalin after administration.

ORGANISM(S): Homo sapiens (Human)

2023-10-24 | PXD044225 | Pride

Bea Osteosarcoma

Design, Synthesis, and Evaluation of Tetrahydropyrrolo[1,2-c]pyrimidines as Capsid Assembly Inhibitors for HBV Treatment.

Not available

S-EPMC5601373 | biostudies-literature

The non-HDL-C to APOB ratio as a predictor of inaccurate LDL-C measurement in patients with chronic intrahepatic cholestasis and jaundice: a retrospective study.

Not available

S-EPMC11457871 | biostudies-literature

Epidemiology and transmission of COVID-19 in 391 cases and 1286 of their close contacts in Shenzhen, China: a retrospective cohort study.

Not available

S-EPMC7185944 | biostudies-literature

The H3K4 methyltransferase KMT2D is an essential cofactor for GATA1 at erythroid gene enhancers

Gene expression during cellular differentiation is coordinated by combinatorial interactions between transcription factors (TFs) and cofactors at promoters and enhancers. The “master TF” GATA1 coordinates gene transcription in a subset of hematopoietic lineages, including erythroid, megakaryocytic, ...

ORGANISM(S): Homo sapiens (Human)

2026-04-10 | PXD076443 | Pride

Kmt2d gata1 enhancer transcription regulation hematopoiesis erythropoiesis epigenetics

Petroleum degradation by Pseudomonas sp. ZS1 is impeded in the presence of antagonist Alcaligenes sp. CT10.

Not available

S-EPMC5972140 | biostudies-literature

Visible light-triggered selective C(sp²)-H/C(sp³)-H coupling of benzenes with aliphatic hydrocarbons.

Not available

S-EPMC10567795 | biostudies-literature

Qualitative Proteome-wide Analysis Reveal the Diverse Functions of Lysine Crotonylation in Dendrobium huoshanense C. Z. Tang et S. J. Cheng

Lysine crotonylation of histone proteins is a newly identified post-translational modification with diversified cellular functions. However, there’s few reports on lysine crotonylation of non-histone proteins in fruit plant cells. By using high-resolution LC-MS coupled with highly sensitive specific...

ORGANISM(S): Dendrobium huoshanense

2021-11-29 | PXD028293 | Pride

Dendrobium huoshanense lysine crotonylation polysaccharide biosythesis

Effects of lysate/tissue storage at -80°C on subsequently extracted EVs of epithelial ovarian cancer tissue origins.

Not available

S-EPMC10139970 | biostudies-literature

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905 Results

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