Yi Xiaohui X - OmicsDI

Show results for

Proteomics (4)
Metabolomics (4)
Transcriptomics (2)

Organisms

Homo sapiens (4)
Macaca fascicularis fascicularis (2)
Rattus norvegicus (1)
Mus musculus (1)

Repository

iProX (4)
MetaboLights (4)
biostudies-arrayexpress (2)

Technology Type

Mass spectrometry (2)
Mass spectrometry assay (2)

Instrument Platform

Liquid Chromatography MS - positive - hilic (4)
Liquid Chromatography MS - - reverse phase (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - negative - reverse phase (2)

Publication Date

2023 (3)
2024 (2)
2025 (2)
2014 (1)
2013 (1)
2019 (1)

CHEBI ID

CHEBI:116314 (2)
CHEBI:12962 (2)
CHEBI:132983 (2)
CHEBI:15676 (2)
CHEBI:15698 (2)
CHEBI:15721 (2)
CHEBI:15728 (2)
CHEBI:15891 (2)
CHEBI:15919 (2)
CHEBI:16020 (2)
CHEBI:16027 (2)
CHEBI:16040 (2)
CHEBI:16235 (2)
CHEBI:16347 (2)
CHEBI:16393 (2)
CHEBI:16411 (2)
CHEBI:16552 (2)
CHEBI:16556 (2)
CHEBI:16628 (2)
CHEBI:16643 (2)
CHEBI:16668 (2)
CHEBI:16680 (2)
CHEBI:16695 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16732 (2)
CHEBI:16737 (2)
CHEBI:16974 (2)
CHEBI:17012 (2)
CHEBI:17053 (2)

Metabolite Name

3-hydroxybutyric acid (2)
(+)-alpha-tocopherol (1)
(-)-perillyl alcohol (1)
(-)-quebrachitol (1)
(-)-riboflavin (1)
(.+/-.)-cromakalim (1)
(2r,3r,4s,5s,6r)-2-[1,7-bis(4-hydroxyphenyl)heptan-3-yloxy]-6-(hydroxymethyl)oxane-3,4,5-triol (1)
(2r,3s,4s,5r,6r)-5-[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy-2-(hydroxymethyl)-6-(2-phenylethoxy)oxane-3,4-diol (1)
(2s,3r,5r,10r,13r,14s,17s)-2,3,14-trihydroxy-10,13-dimethyl-17-[(2r,3r,5r)-2,3,6-trihydroxy-5,6-dimethylheptan-2-yl]-2,3,4,5,9,11,12,15,16,17-decahydro-1h-cyclopenta[a]phenanthren-6-one (1)
(3r,7r,9s,10s,12s,13r,14s,17r)-17-((2r)-6,7-dihydroxy-6-methylheptan-2-yl)-10,13-dimethylhexadecahydro-1h-cyclopenta[a]phenanthrene-3,7,12-triol (1)
(r)-butyrylcarnitine (1)
.delta.-dodecalactone (1)
1,2-di-(9z,12z,15z-octadecatrienoyl)-sn-glycero-3-phosphocholine (1)
1,2-diamino-2-methylpropane (1)
1,2-diarachidonoyl-sn-glycero-3-phosphocholine (1)
1,2-dihexadecanoyl-sn-glycerol (1)
1,2-dihydroxyheptadec-16-en-4-yl acetate (1)
1,2-dihydroxyheptadec-16-yn-4-yl acetate (1)
1,2-dilinoleoyl-sn-glycero-3-phosphoethanolamine (1)
1,2-dilinoleoylglycerol (1)
1,2-dioleoyl-sn-glycero-3-phosphatidylcholine (1)
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-n,n-dimethyl (1)
1,2-dioleoyl-sn-glycerol (1)
1,2-dipalmitoleoyl-sn-glycero-3-phosphocholine (1)
1,2-dipentadecanoyl-sn-glycero-3-phosphocholine (1)
1,6-anhydro-beta-d-glucose (1)
1-(1z-hexadecenyl)-sn-glycero-3-phosphocholine (1)
1-(1z-octadecenyl)-2-(4z,7z,10z,13z,16z,19z-docosahexaenoyl)-sn-glycero-3-phosphoethanolamine (1)
1-(1z-octadecenyl)-sn-glycero-3-phosphocholine (1)
1-aminocyclopropanecarboxylic acid (1)

Study type

Transcription profiling by array (1)
RNA-seq of coding RNA (1)

Release Date

2014 (1)
2013 (1)

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Age-, sex- and proximal-distal-resolved multi-omics identifies regulators of intestinal aging in non-human primates.

The incidence of intestinal diseases increases with age, but the regulators of gut aging and the molecules linking gut aging and diseases remain largely unknown. By profiling the transcriptome, proteome, phosphoproteome and metabolome of 104 Macaca fascicularis large intestinal tissues, ...

2023-12-14 | MTBLS7612 | MetaboLights

A network pharmacology study of Chinese Medicine QSYQ to reveal its underlying multi-compound, multi-target, multi-pathway mode of action

Chinese medicine is a complex system guided by traditional Chinese medicine (TCM) theories, which has proven to be especially effective in treating chronic and complex diseases. However, the underlying modes of action (MOA) are not always systematically investigated. Herein, a systematic study was d...

ORGANISM(S): Rattus norvegicus

2014-01-17 | E-GEOD-54134 | biostudies-arrayexpress

Integrated metabolomics and network pharmacology investigation of cardioprotective effects of myricetin after 1-week high-intensity exercise

Cardiovascular adverse effects caused by high-intensity exercise (HIE) have become a public health problem of widespread concern. As a phytochemical with potential therapeutic effects, the therapeutic effect and metabolic regulation mechanism of myricetin have rarely been studied. In this study, ...

2023-03-06 | MTBLS5608 | MetaboLights

Overlapping and distinct functions of CstF64 and CstF64τ in mammalian mRNA 3’ processing

Our study of CstF64 and CstF64τ revealed both functional overlap and specificity of these two important mRNA 3’ processing factors and provided new insights into the regulatory mechanisms of mRNA 3’ processing. CstF64tau iCLIP-seq in HeLa cells; direct RNA sequencing (DRS) of control HeLa cells, Cs...

ORGANISM(S): Homo sapiens

2013-09-30 | E-GEOD-51156 | biostudies-arrayexpress

Direct data-independent acquisition proteomics with in silico spectral libraries by deep learning

Data-independent acquisition (DIA) proteomics allows systematic and unbiased measurement of protein samples and enables fast quantitative analysis of large cohorts of samples. However, sample-specific spectral libraries are usually required prior to perform DIA experiments. The libraries are built b...

ORGANISM(S): Homo Sapiens

2019-12-02 | PXD014108 |

Low-input redoxomics facilitates global identification of metabolic regulators of oxidative stress in the gut

we developed a low-input and user-friendly pipeline for the simultaneous profiling of five distinct Cys states with regional resolution in the gut of monkeys, including free SH, total Cys oxidation (Sto), sulfenic acid (SOH), S-nitrosylation (SNO), and S-glutathionylation (SSG), shedding light on re...

ORGANISM(S): Macaca Fascicularis Fascicularis Homo Sapiens Mus Musculus

2024-12-16 | PXD053818 |

Age-, sex- and proximal–distal-resolved multi-omics identifies regulators of intestinal aging in non-human primates

To determine the molecular landscape of large intestinal aging, we collected 104 pieces of fresh large intestinal tissue from 26 Macaca fascicularis and performed age-, location-, and sex-resolved multi-omics analyses, including transcriptomics, proteomics, phosphoproteomics and metabolomics.

ORGANISM(S): Macaca Fascicularis Fascicularis

2024-01-18 | PXD039361 |

Proteomics data of colorectal cancer

Paired tumor and distant normal tissues from a cohort of 104 colon cancer patients were collected at West China Hospital and snap-frozen in liquid nitrogen. The informed consent forms were signed by the participants or their family members.

ORGANISM(S): Homo Sapiens

2023-01-11 | PXD039360 |

Sarcosine decreases in sarcopenia and enhances muscle regeneration and adipose thermogenesis by activating ant-inflammatory macrophages (cohort1)

Age-related changes in circulating metabolites significantly influence systemic physiology and may contribute to diseases like sarcopenia. Although metabolic dysregulation is closely linked to sarcopenia, the roles of specific metabolites remain unclear. Here we performed comprehensive plasma met...

2025-05-06 | MTBLS12015 | MetaboLights

Sarcosine decreases in sarcopenia and enhances muscle regeneration and adipose thermogenesis by activating ant-inflammatory macrophages (cohort2)

2025-05-06 | MTBLS12036 | MetaboLights

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