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MetabolomicsLandscape of gut microbiota and metabolites and their interaction in comorbid heart failure and depressive symptoms: a random forest analysis study

Depression is an individual risk factor for poor prognosis in patients with heart failure (HF). Recent studies show that gut microbiota and metabolites have critical role in comorbid HF and depressive symptoms. We recruited 95 subjects including 35 HF patients with depressive symptoms (HF-DS), 36...

2023-10-23 | MTBLS8183 | MetaboLights
UnknownGlobal prevalence of SARS-CoV-2 3CL protease mutations associated with nirmatrelvir or ensitrelvir resistance.
Not available
S-EPMC10101811 | biostudies-literature
TranscriptomicsExpression analysis for nasopharyngeal carcinoma cell lines 5-8F
High metastatic nasopharyngeal carcinoma cell line 5-8F expression patterns. This study was done to detect genes expressed in NPC cell line 5-8F. The microarray analyses were done in a same batch. cells are cultured and harvested at two different time points.
ORGANISM(S): Homo sapiens 
2009-12-10 | E-GEOD-15921 | biostudies-arrayexpress
TranscriptomicsMaize Inbreds Exhibit High Levels of Copy Number Variation (CNV) and Presence/Absence Variation (PAV) in Genome Content
Following the domestication of maize over the past ,10,000 years, breeders have exploited the extensive genetic diversity of this species to mold its phenotype to meet human needs. The extent of structural variation, including copy number variation (CNV) and presence/absence variation (PAV), which a...
ORGANISM(S): Zea mays 
2009-11-19 | E-GEOD-16938 | biostudies-arrayexpress
TranscriptomicsExpression data of overexpression of ABF-1 in SKW cells
ABF-1, a bHLH trancriptional repressor expresses in human activated B cells. Overexpression of ABF-1 in a SKW lymphoblastoid cells suppressed IgM production. We used cDNA microarray to identify genes under ABF-1 regulation. SKW cells ectopically expressed ABF-1-GFP or GFP were harvested for RNA ext...
ORGANISM(S): Homo sapiens 
2014-01-15 | E-GEOD-26583 | biostudies-arrayexpress
UnknownPathological and genetic aspects of spontaneous mammary gland tumor in Tupaia belangeri (tree shrew).
Not available
S-EPMC7233572 | biostudies-literature
TranscriptomicsExpression analysis for nasopharyngeal carcinoma cell lines (5-8F and 6-10B)
High metastatic nasopharyngeal carcinoma cell line 5-8F expression patterns against low metastatic nasopharyngeal carcinoma cell line 6-10B. This study was done to screen genes related with metastasis in NPC. The microarray analyses were done in a same batch. 6-10B cells are cultured and harvested a...
ORGANISM(S): Homo sapiens 
2009-12-10 | E-GEOD-15903 | biostudies-arrayexpress
ProteomicsSIRT3 functions as an eraser of histone H3K9 lactylation to modulate transcription for inhibiting the progression of esophageal cancer
As a novel post-translational modification of histone derived from lactate, lysine lactylation (Kla) links lactate metabolism to epigenetic regulation, playing a role in modulation of gene expression in tumor and immune microenvironment. Evidence so far indicates that HDAC1-3 can catalyze the remova...
ORGANISM(S): Homo Sapiens 
2025-02-27 | PXD061251 |
ProteomicsMudPIT analyses of the proteins co-purified with the Interactor of Little Elongation Complex ELL subunit 1 (FLAG-ICE1), WT MED26, and D2G8 NTD-mutant MED26, affinity-purified from HEK293T cell lines
Protein Complexes Purification: We generated 293FRT cell lines that stably express FLAG-tagged ICE1 (Interactor of Little Elongation Complex ELL subunit 1; KIAA0947). We extracted nuclear proteins in the presence of Benzonase to digest nucleic acids, including both DNA and RNA, and purified the lit...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-02-20 | MSV000083465 | MassIVE
ProteomicsRNA Pull-Down identifies the interactive proteins with tRF-Gln-CTG-026 in HL-7702 and AML12 cells
RNA Pull-Down identifies the interactive proteins with tRF-Gln-CTG-026 in HL-7702 and AML12 cells
ORGANISM(S): Homo Sapiens Mus Musculus 
2022-04-08 | PXD033097 |
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