Yoelii - OmicsDI

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Unknown (398)
Genomics (112)
Transcriptomics (61)
Proteomics (22)
Other (2)
Metabolomics (2)

Organisms

Mus musculus (30)
Plasmodium yoelii (26)
Schizophyllum commune H4-8 (15)
Mycobacterium tuberculosis SP7 (15)
Oryza sativa Japonica Group (15)
Candidatus Endoriftia persephonae (15)
Mycobacterium tuberculosis SP10 (15)
Mycobacterium tuberculosis SP13 (15)
Mycobacterium tuberculosis SP22 (15)
Chlamydomonas reinhardtii (15)
Pyricularia oryzae P131 (15)
Enterococcus mundtii CRL35 (15)
Oncorhynchus tshawytscha (15)
Pseudomonas canadensis (15)
Strongylocentrotus purpuratus (15)
Influenza A virus (A/California/04/2009(H1N1)) (15)
Homo (15)
Pseudomonas aeruginosa PAO1H2O (15)
Human alphaherpesvirus 1 strain 17 (15)
Quercus petraea (15)
Canis lupus (15)
Plasmodium yoelii yoelii 17XNL (9)
Plasmodium falciparum (6)
Plasmodium yoelii yoelii (4)
Plasmodium chabaudi (2)
Plasmodium berghei (2)
Homo sapiens (2)
Plasmodium knowlesi (1)
Plasmodium vivax (1)
Plasmodium falciparum 3D7 (1)

Organisms

Mus musculus (38)
Plasmodium yoelii (17)
Plasmodium yoelii yoelii (8)
Plasmodium yoelii nigeriensis (4)
Plasmodium yoelii yoelii 17XNL (3)
Plasmodium yoelii 17X (2)
Anopheles stephensi (2)
Homo sapiens (2)
mouse gut metagenome (2)
Plasmodium yoelii YM (1)
Plasmodium chabaudi (1)
Plasmodium knowlesi (1)
Plasmodium falciparum (1)
unidentified (1)
Plasmodium berghei ANKA (1)

Repository

ENA (109)
geo (52)
pride (15)
biostudies-arrayexpress (14)
iProX (4)
MetaboLights (2)
PeptideAtlas (2)
MassIVE (1)

Tissue

Blood (7)
Blood cell (5)
Reticulocyte (1)
Blood plasma (1)
Erythrocyte (1)

Disease

Malaria (9)
Plasmodium falciparum malaria (2)

Technology Type

Mass Spectrometry (15)
Affinity purification coupled with mass spectrometry proteomics (6)
Shotgun proteomics (5)
Data-dependent acquisition (3)
Mass spectrometry (2)
Gel-based experiment (2)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (1)
Orbitrap Eclipse (1)
Q Exactive (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
LTQ Velos (1)
LTQ Orbitrap Velos (1)

Publication Date

2022 (10)
2018 (9)
2019 (8)
2025 (7)
2021 (7)
2010 (6)
2024 (6)
2012 (5)
2023 (5)
2011 (4)
2008 (4)
2017 (4)
2016 (3)
2014 (2)
2013 (2)
2020 (2)
2009 (2)
2015 (1)

CHEBI ID

CHEBI:15035 (2)
CHEBI:17189 (2)
CHEBI:81014 (2)
CHEBI:16974 (2)
CHEBI:32389 (2)
CHEBI:28997 (2)
CHEBI:30413 (2)
CHEBI:17033 (2)
CHEBI:30754 (2)
CHEBI:16411 (2)
CHEBI:16893 (2)
CHEBI:16990 (2)
CHEBI:17431 (2)
CHEBI:17151 (2)
CHEBI:17306 (2)
CHEBI:17992 (2)
CHEBI:28790 (2)
CHEBI:17311 (2)
CHEBI:44747 (2)
CHEBI:18089 (2)
CHEBI:37550 (2)
CHEBI:16566 (2)
CHEBI:46961 (2)
CHEBI:17012 (2)
CHEBI:16827 (2)
CHEBI:38299 (2)
CHEBI:29009 (2)
CHEBI:28865 (2)
CHEBI:30887 (2)
CHEBI:15318 (2)

Metabolite Name

1,1-Dichloroethylene (1)
Coproporphyrinogen I (1)
Bromobenzene-3,4-oxide (1)
Bromobenzene-2,3-oxide (1)
Pantethine (1)
Chrysoeriol (1)
Dihydrocaffeate (1)
Tyrosine methyl ester (1)
6beta-hydroxylithocholate (1)
3-dehydrocholate (1)
Biochanin A (1)
Lactobionate (1)
Hyodeoxycholate (1)
Glucose 1-phosphate (1)
4-hydroxymandelate (1)
Inositol hexakisphosphate (1)
Guanosine-2',3'-cyclic monophosphate (1)
4-Phosphopantothenoylcysteine (1)
11b-Hydroxyprogesterone (1)
2'-Deoxyinosine triphosphate (1)
Tyrosol (1)
Soyasaponin III (1)
Soyasaponin I (1)
Sinapate (1)
N-acetylmuramate (1)
N6-formyllysine (1)
Lithocholate (1)
Glycitein (1)
Galacturonate (1)
Enterolactone (1)

First Public Date

2014 (14)
2025 (12)
2013 (12)
2024 (11)
2021 (11)
2023 (10)
2022 (9)
2019 (7)
2018 (6)
2026 (4)
2017 (4)
2015 (3)
2020 (2)
2016 (1)
2012 (1)
2011 (1)
2010 (1)

Classification

protozoa (39)

Study type

Transcription profiling by array (9)
RNA-seq of coding RNA (3)
Unknown experiment type (1)
ATAC-seq (1)

Release Date

2020 (30)
2023 (29)
2022 (29)
2018 (25)
2016 (25)
2017 (24)
2014 (22)
2024 (21)
2025 (20)
2021 (19)
2015 (19)
2011 (18)
2010 (17)
2008 (17)
2019 (17)
2012 (16)
2013 (15)
2009 (10)
2005 (9)
2006 (8)
2007 (6)
2000 (5)
2002 (3)
2004 (2)
2001 (2)
2026 (1)
2003 (1)
1999 (1)
1998 (1)

Lab affiliation

Biochemistry and Molecular Biology Department, Eberly College of Science, Pennsylvania State University, University Park, PA, USA. (3)
School of Life Sciences, Xiamen University (2)
Institute for Systems Biology (2)
NTU SBS School of Biological Science SBS-04n-08, Singapore 637551 (1)
Center for Malaria Research, Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802 (1)
ICREA at ISGlobal Institute for Glbal Health, Hospital Clinic - Universitat de Barcelona, Barcelona, Spain and IGTP Institut d'Investigació Germans Trias i Pujol, Badalona, Spain (1)
Entomology Department, Penn State Univeristy (1)
Tata Institute of Fundamental Research, Mumbai (1)
Professor and Deputy Director, Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to be University), Mangalore, India (1)
James Cook University, Cairns Campus, QLD Australia (1)
Department of Pathology, University of Cambridge, Tennis Court Road, Cambridge, CB2 1QP, UK (1)

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Proteomics approaches for decoding Plasmodium yoelii biology

Plasmodium yoelii is a rodent parasite commonly used as a model to study liver-stage development in host system during malaria infection. Mass spectrometry-based proteomics approaches helps in understanding the proteomic profiling of parasite and provided opportunities to explore the mechanisms cont...

ORGANISM(S): Plasmodium yoelii yoelii 17XNL Mus musculus (Mouse)

2022-04-01 | PXD013932 | Pride

Proteome of Plasmodium yoelii lines NSS and NSR

Proteomic analysis of blood stages of Plasmodium yoelii lines NSS and NSR

ORGANISM(S): Plasmodium yoelii

2024-02-04 | PXD047811 | Pride

Lc-msms Proteome Plasmodium yoelii

Ubiquitinome of Plasmodium yoelii lines NSS and NSR

Ubiquitinome profiling of blood stages of Plasmodium yoelii lines NSS and NSR

ORGANISM(S): Plasmodium yoelii

2024-02-04 | PXD047782 | Pride

Ubiquitinome Lc-msms Plasmodium yoelii

Proteomic analysis of Plasmodium yoelii salivary gland sprozoites

ORGANISM(S): Plasmodium yoelii yoelii 17XNL

2019-10-02 | PXD009727 | Pride

Plasmodium yoelii Salivary gland sprozoite

Plasmodium yoelii yoelii strain:17XNL

Plasmodium yoelii yoelii strain:17XNL Genome sequencing and assembly

PRJNA1436 | ENA

Host influence on in vivo gene expression profiles of Plasmodium yoelii blood-stage malaria parasites

Microarray studies using synchronized Plasmodium falciparum parasites have revealed a ‘continuous cascade’ of gene expression. Reports vary regarding the stability in these transcriptional patterns in the presence of external stressors. Using Plasmodium yoelii 17X parasites replicating in vivo, we...

ORGANISM(S): Plasmodium yoelii

2011-11-01 | E-GEOD-31274 | biostudies-arrayexpress

Proteomic analysis of Plasmodium yoelii oocyst sporozoites

ORGANISM(S): Plasmodium yoelii yoelii 17XNL

2019-10-02 | PXD009729 | Pride

Oocyst sporozoites Plasmodium yoelii

Plasmodium yoelii RNA-Seq

Plasmodium yoelii YM asexual blood stage parasites express multiple members of the py235 gene family, part of the super-family of genes including those coding for Plasmodium vivax reticulocyte binding proteins and Plasmodium falciparum RH proteins. Dr Tony Holder's laboratory (NIMR, London) has been...

ORGANISM(S): Plasmodium yoelii

2011-04-25 | E-MTAB-636 | biostudies-arrayexpress

Plasmodium yoelii

Transcriptional profiling of P. yoelii SAP1 knockout

PRJNA113155 | ENA

The Plasmodium yoelii yoelii 17X genome project

Comparative analysis of the rodent malaria genome Plasmodium yoelii yoelii 17X

PRJEB5706 | ENA

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