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TranscriptomicsSteady-state samples of Methanococcus maripaludis MM901 grown on formate under hydrogen limited conditions
Hydrogenotrophic methanogenic Archaea are defined by a H2 requirement for growth. Despite this requirement, many hydrogenotrophs are also capable of growth with formate as an electron donor for methanogenesis. Hydrogenotrophs respond to H2 starvation both phenotypically and at the level of gene expr...
ORGANISM(S): Methanococcus maripaludis S2 
2013-05-03 | E-GEOD-42111 | biostudies-arrayexpress
TranscriptomicsSteady-state samples of Methanococcus maripaludis MM901:del_frcA (MMP0820)
Effects of frcA (MMP0820) on physiology and regulation of methanogenesis in Methanococcus maripaludis The strain was grown by continuous culture in a one-liter fermenter (New Brunswick Scientific, Edison, NJ) at 37M-BM-0C (FEMS Microbiol Lett 238: 85-91, 2004). Medium and gas compositions were modif...
ORGANISM(S): Methanococcus maripaludis S2 
2013-09-16 | E-GEOD-42121 | biostudies-arrayexpress
TranscriptomicsSteady-state samples of Methanococcus maripaludis MM901:del_mtd (MMP0372)
Effects of mtd (MMP0372) on physiology and regulation of methanogenesis in Methanococcus maripaludis The strain was grown by continuous culture in a one-liter fermenter (New Brunswick Scientific, Edison, NJ) at 37M-BM-0C (FEMS Microbiol Lett 238: 85-91, 2004). Medium and gas compositions were modifi...
ORGANISM(S): Methanococcus maripaludis S2 
2013-09-16 | E-GEOD-42123 | biostudies-arrayexpress
TranscriptomicsSteady-state samples of Methanococcus maripaludis MM901:del_fruA (MMP1382)-del_frcA (MMP0820)
Effects of fruA (MMP1382) and frcA (MMP0820) on physiology and regulation of methanogenesis in Methanococcus maripaludis The strain was grown by continuous culture in a one-liter fermenter (New Brunswick Scientific, Edison, NJ) at 37M-BM-0C (FEMS Microbiol Lett 238: 85-91, 2004). Medium and gas comp...
ORGANISM(S): Methanococcus maripaludis S2 
2013-09-16 | E-GEOD-42122 | biostudies-arrayexpress
TranscriptomicsSteady-state samples of Methanococcus maripaludis MM901 grown on N14 or N15
Effects of hydrogen on physiology and regulation of methanogenesis in Methanococcus maripaludis The strain was grown by continuous culture in a one-liter fermenter (New Brunswick Scientific, Edison, NJ) at 37M-BM-0C (FEMS Microbiol Lett 238: 85-91, 2004). Medium and gas compositions were modified fr...
ORGANISM(S): Methanococcus maripaludis S2 
2013-09-16 | E-GEOD-42124 | biostudies-arrayexpress
TranscriptomicsTime series of Methanococcus maripaludis MM901, a shift from a H2-excess and N-limiting condition to a H2-limited and N-excess condition in chemostats (growth rate held constant)
Methanogens catalyze the critical, methane-producing step (called methanogenesis) in the anaerobic decomposition of organic matter and have applications in carbon-neutral fuel production. Here, we present the first predictive model of global gene regulation of methanogenesis in a hydrogenotrophic me...
ORGANISM(S): Methanococcus maripaludis S2 
2013-09-16 | E-GEOD-42126 | biostudies-arrayexpress
TranscriptomicsTime series of Methanococcus maripaludis MM901, a shift from a H2-excess condition to a H2-limiting condition
Methanogens catalyze the critical, methane-producing step (called methanogenesis) in the anaerobic decomposition of organic matter and have applications in carbon-neutral fuel production. Here, we present the first predictive model of global gene regulation of methanogenesis in a hydrogenotrophic me...
ORGANISM(S): Methanococcus maripaludis S2 
2013-09-16 | E-GEOD-42143 | biostudies-arrayexpress
TranscriptomicsTime series of Methanococcus maripaludis MM901:del_mtd (MMP0372), a shift from a H2-excess and P-limiting condition to a H2-limited and P-excess condition in chemostats (growth rate held constant)
Methanogens catalyze the critical, methane-producing step (called methanogenesis) in the anaerobic decomposition of organic matter and have applications in carbon-neutral fuel production. Here, we present the first predictive model of global gene regulation of methanogenesis in a hydrogenotrophic me...
ORGANISM(S): Methanococcus maripaludis S2 
2013-09-16 | E-GEOD-42166 | biostudies-arrayexpress
TranscriptomicsTime series of Methanococcus maripaludis MM901:del_fruA (MMP1382)-del_frcA (MMP0820), a shift from a H2-excess and P-limiting condition to a H2-limited and P-excess condition in chemostats (growth rate held constant)
Methanogens catalyze the critical, methane-producing step (called methanogenesis) in the anaerobic decomposition of organic matter and have applications in carbon-neutral fuel production. Here, we present the first predictive model of global gene regulation of methanogenesis in a hydrogenotrophic me...
ORGANISM(S): Methanococcus maripaludis S2 
2013-09-16 | E-GEOD-42165 | biostudies-arrayexpress
TranscriptomicsTime series of Methanococcus maripaludis MM901, a shift from a H2-limited condition to a H2-excess condition
Methanogens catalyze the critical, methane-producing step (called methanogenesis) in the anaerobic decomposition of organic matter and have applications in carbon-neutral fuel production. Here, we present the first predictive model of global gene regulation of methanogenesis in a hydrogenotrophic me...
ORGANISM(S): Methanococcus maripaludis S2 
2013-09-16 | E-GEOD-42167 | biostudies-arrayexpress
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