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ProteomicsHOXB13 WT and G84E mass spectrometry
To identify potential cofactors of HOXB13 in suppressing lipogenic programs in prostate cancer cells, we performed tandem affinity purification followed by mass spectrometry analysis of WT and G84E HOXB13 expressed in LNCaP cells. Out of the HOXB13-enriched proteins are previously reported interacto...
ORGANISM(S): Homo sapiens (Human) 
2023-03-11 | PXD030810 | Pride
Prostate cancer Tandem affinity purification Hoxb13 
UnknownMorphological characteristics of seed starch granules of Fagaceae in South China and their implication in paleodiet.
Not available
S-EPMC9702991 | biostudies-literature
ProteomicsIdentify FOXA2-interacting proteins in NEPC cells
Following extensive treatment with androgen receptor (AR) pathway inhibitors, a significant number of metastatic prostate cancer develop treatment resistance, and approximately 20% of these castration-resistant prostate cancers (CRPC) transdifferentiate, at least partially, into neuroendocrine (NE) ...
ORGANISM(S): Homo sapiens (Human) 
2025-06-12 | PXD061080 | Pride
Nepc Foxa2 
ProteomicsIdentify FOXA2-interacting proteins in NEPC cells
Following extensive treatment with androgen receptor (AR) pathway inhibitors, a significant number of metastatic prostate cancer develop treatment resistance, and approximately 20% of these castration-resistant prostate cancers (CRPC) transdifferentiate, at least partially, into neuroendocrine (NE) ...
ORGANISM(S): Homo sapiens (Human) 
2025-06-12 | PXD061127 | Pride
Nepc Foxa2 
TranscriptomicsGlobal transcriptomic changes induced by manipulate MSH1 gene in tomato using next generation sequencing
apical meristem tissues from 4-week-old wild type, epiF3, MSH1 gene mutant including (mild-DR and dwarf-DR) plants were used in this experiment. For each genotype, the transcriptome was sequenced with 3 biological replicates.
ORGANISM(S): Solanum lycopersicum 
2015-02-23 | E-GEOD-65242 | biostudies-arrayexpress
ProteomicsDivergent mitochondrial responses and metabolic signal pathways secure the azole resistance in Crabtree-positive and negative Candida species
we performed mitochondrial proteomic analysis on multiple Candida species (C. albicans, C. glabrata, C. krusei and Candida auris) and analyzed the differentially expressed mitochondrial proteins (DEMPs) between azole-sensitive and azole-resistant Candida species.
ORGANISM(S): Fungal Sp. Nt-01 
2023-09-05 | PXD045101 |
UnknownA positive feedback loop between TAZ and miR-942-3p modulates proliferation, angiogenesis, epithelial-mesenchymal transition process, glycometabolism and ROS homeostasis in human bladder cancer.
Not available
S-EPMC7836562 | biostudies-literature
TranscriptomicsTranscriptional profiles of PA1 teratoma cells transfected by RIPK1, RIPK2, RIPK3, or RIPK4
RIPK4 but not the related kinases RIPK1, RIPK2, and RIPK3 caused similar transcriptional changes to Wnt3a. PA1 cells were transfected by 8ug RIPK1, RIPK2, RIPK3, or RIPK4 for 48h, RNA were extracted and sequenced.
ORGANISM(S): Homo sapiens 
2013-02-04 | E-GEOD-43362 | biostudies-arrayexpress
MetabolomicsVGLL4 modulates Paneth cells and sustains intestinal homeostasis.
Paneth cells are defensive cells in the intestinal tract, which secrete niche factors and antimicrobial peptides (AMPs) to maintain the small intestinal stem cell niche and immune homeostasis. Here, we show that Vestigial-like family member 4 (VGLL4) plays a pivotal role in maintaining small intesti...
2026-03-12 | MTBLS10456 | MetaboLights
ProteomicsDIA-Based Quantitative Proteomic Analysis of HAEC cells
We explored the protective mechanisms of phytochemicals against palmitate induced lipotoxicity using data independent acquisition-based quantitative proteomic. Among the differently expressed proteins in response to palmitate liptoxicity, 93 of them were reversed after apigenin administration and th...
ORGANISM(S): Homo Sapiens 
2020-07-17 | PXD020424 |
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