Yue Can C - OmicsDI

Show results for

Unknown (783)
Proteomics (49)
Genomics (41)
Transcriptomics (33)
Metabolomics (7)
Models (2)

Organisms

Homo sapiens (80)
Mus musculus (14)
Escherichia coli (4)
Rattus norvegicus (3)
Rattus (2)
Nicotiana benthamiana (2)
Caenorhabditis elegans (2)
Saccharomyces cerevisiae (2)
Camellia sinensis (1)
Marmota monax (1)
Zea mays (1)
Danio rerio (1)
Bacillus altitudinis (1)
Drosophila melanogaster (1)
Sedum plumbizincicola (1)
Cervus elaphus hippelaphus (1)
Macaca mulatta (1)
Oryza sativa (1)
Pseudomonas sp. AR40 (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028s Wu (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 (1)
Tospovirus kiwifruit/YXW/2014 (1)
Triticum aestivum (1)

Repository

biostudies-arrayexpress (38)
EGA (36)
iProX (22)
pride (22)
MetaboLights (7)
MassIVE (3)
BioModels (2)
PAXDB (2)

Tissue

Cell culture (6)
Liver (2)
Lung (2)
Alveolar system (1)
Blood plasma (1)
Blood vessel smooth muscle cell (1)
Brain (1)
Colon (1)
Endosperm (1)
Kidney (1)
Leaf (1)
Macrophage (1)
Melanocyte (1)
Shoot (1)
Stem cell (1)
Stomach (1)

Disease

Adult respiratory distress syndrome (1)
Cardiovascular system disease (1)
Lung cancer (1)
Skin melanoma (1)
Stomach cancer (1)

Technology Type

Mass Spectrometry (22)
Shotgun proteomics (11)
Mass spectrometry (6)
Bottom-up proteomics (5)
Affinity purification coupled with mass spectrometry proteomics (2)
Data-independent acquisition (2)
Top-down proteomics (2)
Mass spectrometry assay (1)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)

Instrument Platform

Illumina HiSeq 2500 (3)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Illumina NovaSeq X (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap Elite (1)
LTQ Orbitrap Velos (1)
Q Exactive (1)
Q Exactive Plus (1)
5975C Series GC/MSD (Agilent) (1)
Agilent GC/MS, LECO GC/TOFMS (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - alternating - reverse phase (1)
TSQ Quantum GC (Thermo Scientific) (1)
UPLC Q-TOF Premier (Waters) (1)

Publication Date

2015 (11)
2022 (10)
2021 (9)
2024 (8)
2025 (8)
2013 (7)
2014 (6)
2023 (6)
2012 (5)
2019 (5)
2026 (5)
2020 (4)
2010 (4)
2016 (3)
2011 (1)
2008 (1)
2005 (1)
2018 (1)
2017 (1)

UNIPROT ID/AC

1FEH1_WHEAT (2)
4565.Traes_1AL_3CF82DD08.2 (2)
4565.Traes_1AL_3FDB6FDB4.1 (2)
4565.Traes_1AL_44FB362A9.2 (2)
4565.Traes_1AL_4E621A250.2 (2)
4565.Traes_1AL_51D597B92.1 (2)
4565.Traes_1AL_52E56C8D3.1 (2)
4565.Traes_1AL_53F3380AF.1 (2)
4565.Traes_1AL_5E2C30B46.1 (2)
4565.Traes_1AL_6B64D0E80.1 (2)
4565.Traes_1AL_72202D9DF.1 (2)
4565.Traes_1AL_738358449.1 (2)
4565.Traes_1AL_78CB13657.2 (2)
4565.Traes_1AL_7B509569F.1 (2)
4565.Traes_1AL_7CF571E9F.1 (2)
4565.Traes_1AL_7D6DC73FC.2 (2)
4565.Traes_1AL_9C2D7A0A6.1 (2)
4565.Traes_1AL_9EFC68149.1 (2)
4565.Traes_1AL_A47D32D30.1 (2)
4565.Traes_1AL_A69755144.1 (2)
4565.Traes_1AL_B15921488.1 (2)
4565.Traes_1AL_BAAF4391C.1 (2)
4565.Traes_1AL_BAB3D977B.1 (2)
4565.Traes_1AL_D06A380E9.2 (2)
4565.Traes_1AL_D39C4F23A.2 (2)
4565.Traes_1AL_D789B5634.1 (2)
4565.Traes_1AL_D8B97BD8D.1 (2)
4565.Traes_1AL_D8FE82B94.1 (2)
4565.Traes_1AL_E07235CF1.1 (2)
4565.Traes_1AL_EEB8BBB6B.1 (2)

CHEBI ID

CHEBI:15428 (3)
CHEBI:15611 (3)
CHEBI:15741 (3)
CHEBI:15753 (3)
CHEBI:16449 (3)
CHEBI:16708 (3)
CHEBI:17568 (3)
CHEBI:17724 (3)
CHEBI:18012 (3)
CHEBI:18211 (3)
CHEBI:18257 (3)
CHEBI:28757 (3)
CHEBI:29016 (3)
CHEBI:30746 (3)
CHEBI:30769 (3)
CHEBI:1148 (2)
CHEBI:15318 (2)
CHEBI:15756 (2)
CHEBI:15940 (2)
CHEBI:16010 (2)
CHEBI:16113 (2)
CHEBI:16196 (2)
CHEBI:16265 (2)
CHEBI:16335 (2)
CHEBI:16525 (2)
CHEBI:16704 (2)
CHEBI:16737 (2)
CHEBI:16750 (2)
CHEBI:16811 (2)
CHEBI:29108 (1)

Metabolite Name

Ornithine (3)
2-Hydroxybutyric acid (2)
Adenine (2)
Alanine (2)
Arginine (2)
Benzoate (2)
Citric acid (2)
Citrulline (2)
Dimethylglycine (2)
Fructose (2)
Glucose (2)
Glycine (2)
Histidine (2)
Homoserine (2)
Isovaleric acid (2)
Methylmalonic acid (2)
Nicotinic acid (2)
Oleic acid (2)
Oxoadipic acid (2)
Pipecolic acid (2)
Pyroglutamic acid (2)
Sarcosine (2)
Succinic acid (2)
Threonine (2)
Uracil (2)
(3S)-3-hydroxy-3-methylglutaryl-CoA (1)
(N(omega)-L-arginino)succinic acid (1)
(R)-3-(4-hydroxyphenyl)lactic acid (1)
(S)-2,3,4,5-tetrahydropyridine-2-carboxylate (1)
(S)-5-Amino-3-oxohexanoate (1)

IsPrivate

False (2)

Modelling Approach

Ordinary differential equation model (2)

Study type

Transcription profiling by array (12)
RNA-seq of coding RNA (9)
Comparative genomic hybridization by array (4)
Methylation profiling by high throughput sequencing (4)
RNA-seq of non coding RNA (3)
Unknown experiment type (2)
Other (2)
ChIP-seq (1)
Methylation profiling by array (1)

Release Date

2023 (125)
2022 (107)
2024 (105)
2025 (97)
2021 (78)
2020 (63)
2019 (43)
2017 (35)
2018 (30)
2015 (28)
2014 (22)
2016 (16)
2013 (16)
2026 (15)
2012 (12)
2010 (10)
2008 (6)
2009 (4)
2011 (3)
2005 (2)
2007 (2)
2006 (1)
2003 (1)

Lab affiliation

Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing University of Chemical Technology (1)
Center for Alzheimer's and Related Dementias (CARD), National Institute on Aging and National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA. (1)
Chinese Academy of Agricultural Sciences (1)
College of Life Science, Capital Normal University, 100048 Beijing, China (1)
College of Pharmacy and Pharmaceutical Sciences, Washington State University, Spokane, WA 99202, USA (1)
Department of Biochemistry and Molecular Biology, College of Basic Medicine, Key Laboratory of Medical Biotechnology of Hebei Province, Hebei Medical University, Shijiazhuang, China (1)
Department of Obstetrics/Gynecology, Joint Laboratory of Reproductive Medicine (SCU-CUHK), Key Laboratory of Obstetric, Gynecologic and Pediatric Diseases and Birth Defects of Ministry of Education, West China Second University Hospital, Sichuan University, Chengdu 610041, China. (1)
Department of Pathogen Biology, School of Clinical and Basic Medical Sciences, Shandong First Medical University & Shandong Academy of Medical Sciences (1)
Department of Pathology, University of Michigan, USA (1)
Department of Pharmaceutical Sciences, School of Pharmacy, University of Maryland, Baltimore (1)
Department of Rehabilitation Medicine, The Second Affiliated Hospital, School of Medicine, South China University of Technology, Guangzhou 510180, China (1)
Hangzhou Institute for Advanced Study, University of Chinese Academy of Science (1)
HeFei University of Technology (1)
Key Laboratory of Cellular Function and Pharmacology of Jilin Province, Yanbian University, (1)
Key Laboratory of Rare and Uncommon Diseases, Department of Microbiology, Institute of Basic Medicine, Shandong First Medical University & Shandong Academy of Medical Sciences (1)
Lanzhou University (1)
Nir Kalisman, Dept. of Biological Chemistry, Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel (1)
State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China (1)
The LSUHSC Proteomics Core3 Facility The Department of Biochemistry and Molecular Biology Louisiana State University Health Sciences Center New Orleans, LA 70112 (1)
Thoracic and GI Malignancies Branch, CCR, NCI, NIH, Bethesda, MD (1)
University of Minnesota at Twin Cities (1)
professor (1)

Previous page
1 / 92
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 92
Next page

Sort by:

Relevance

Page size

A Ribonuclease Coordinates siRNA Amplification and mRNA Cleavage during RNAi

Effective silencing by RNA-interference (RNAi) depends on mechanisms that amplify and propagate the silencing signal. In some organisms, small-interfering (si) RNAs are amplified from target mRNAs by RNA-dependent RNA polymerase (RdRP). Both RdRP recruitment and mRNA silencing require Argonaute prot...

ORGANISM(S): Caenorhabditis elegans

2015-01-29 | E-GEOD-59300 | biostudies-arrayexpress

RNA-seq of 5dpf zebrafish tert F2 larvae with/without injury

Bulk RNA-Seq of muscle isolated from zebrafish carrying a mutation in telomerase (tert) and wildtype sibling animals aged 5 days at 24 hpf following needle stick injury. RNA was extracted from pooled samples of n=50 larvae each on 30/01/2024. Libraries were constructed using Illumina TruSeq RNA Libr...

ORGANISM(S): Danio rerio

2025-09-25 | E-MTAB-15577 | biostudies-arrayexpress

Genome-wide detection of enhancer-hijacking events from chromatin interaction data in rearranged genomes.

Not available

S-EPMC8191102 | biostudies-literature

Transcription profiling of human embryonic stem (ES) cells. Undifferentiated cells of different passage numbers (p19 and p128) were vs cells differentiated in hanging drops for 5 days (d5 embryoid bodies) or expanded on gelatin coated dishes for a further 9 days (d14 embryoid bodies)

Undifferentiated cells of different passage numbers (p19 and p128) were compared to cells differentiated in hanging drops for 5 days (d5 embryoid bodies) or expanded on gelatin coated dishes for a further 9 days (d14 embryoid bodies).

ORGANISM(S): Homo sapiens

2005-08-31 | E-MEXP-303 | biostudies-arrayexpress

Forestation at the right time with the right species can generate persistent carbon benefits in China.

Not available

S-EPMC10576152 | biostudies-literature

LeuRS can leucylate type I and type II tRNALeus in Streptomyces coelicolor.

Not available

S-EPMC6614811 | biostudies-literature

Identification of Conserved and Diverse Metabolic Shifts during Rice Grain Development (GC-MS assay)

Seed development dedicates to reserve synthesis and accumulation and uncovering its genetic and biochemical mechanisms has been a major research focus. Although proteomic and transcriptomic analyses revealed dynamic changes of genes and enzymes involved, the information regarding concomitant meta...

2016-05-03 | MTBLS288 | MetaboLights

Identification of lysine sorbylation

We discovered that cellular uptake of sorbate, an FDA-approved and widely used food preservative, can induce lysine sorbylation (Ksor), a new posttranslational modification and epigenetic mark. Proteomics analysis identified over 20 histone sorbylation sites in cells and mouse liver as well as over ...

ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse)

2025-04-22 | PXD058007 | Pride

Immune system‑associated genes increase malignant progression and can be used to predict clinical outcome in patients with hepatocellular carcinoma.

Not available

S-EPMC7115743 | biostudies-literature

Schoolchildren's motivation for viewing Chinese opera animation according to opera genre.

Not available

S-EPMC10566701 | biostudies-literature

Previous page
1 / 92
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 92
Next page

Sort by:

Relevance

Page size

915 Results

Show results for

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

CHEBI ID

Metabolite Name

IsPrivate

Modelling Approach

Study type

Release Date

Lab affiliation

OmicsDI is part of the ELIXIR infrastructure

Tweets