Zhan Chen C - OmicsDI

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Unknown (1041)
Proteomics (27)
Transcriptomics (9)
Metabolomics (6)
Genomics (4)

Organisms

Homo sapiens (19)
Mus musculus (8)
Oryza sativa (2)
Deinococcus gobiensis (1)
Yersinia pestis (1)
Setaria italica (1)
Arabidopsis thaliana (1)
Ailuropoda melanoleuca (1)
Aspergillus oryzae (1)
Enterobacter hormaechei (1)
Tetragenococcus halophilus (1)
Triticum aestivum/Septoria tritici mixed cDNA library (1)
Weissella confusa (1)
Weissella paramesenteroides (1)
Abelmoschus esculentus (1)
Pogostemon cablin (1)

Organisms

Yersinia pestis (1)

Repository

iProX (17)
biostudies-arrayexpress (10)
pride (10)
MetaboLights (6)
EGA (2)
ENA (1)

Tissue

Cell culture (2)
Blood serum (1)
HuH-7 cell (1)
Intervertebral disc (1)
Leaf (1)
Macrophage (1)
Microglial cell (1)
Permanent cell line cell (1)
Plant cell (1)
Whole body (1)

Disease

Colon cancer (2)

Technology Type

Mass Spectrometry (10)
Mass spectrometry (6)
Data-dependent acquisition (3)
Shotgun proteomics (3)
Bottom-up proteomics (2)
Top-down proteomics (2)
Illumina HiSeq 2000 (1)
Mass spectrometry imaging (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - positive - reverse phase (4)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - positive (2)

Publication Date

2023 (8)
2021 (7)
2020 (3)
2025 (3)
2024 (3)
2019 (3)
2015 (2)
2012 (2)
2011 (2)
2026 (2)
2022 (2)
2014 (1)
2013 (1)
2010 (1)
2018 (1)
2017 (1)
2016 (1)

CHEBI ID

CHEBI:137157 (2)
CHEBI:138426 (2)
CHEBI:15354 (2)
CHEBI:15971 (2)
CHEBI:16264 (2)
CHEBI:16393 (2)
CHEBI:16750 (2)
CHEBI:16828 (2)
CHEBI:17295 (2)
CHEBI:17345 (2)
CHEBI:17368 (2)
CHEBI:17596 (2)
CHEBI:17597 (2)
CHEBI:17752 (2)
CHEBI:17895 (2)
CHEBI:186351 (2)
CHEBI:187993 (2)
CHEBI:520985 (2)
CHEBI:52649 (2)
CHEBI:55328 (2)
CHEBI:64566 (2)
CHEBI:73004 (2)
CHEBI:73218 (2)
CHEBI:73512 (2)
CHEBI:75168 (2)
CHEBI:7916 (2)
CHEBI:79283 (2)
CHEBI:82966 (2)
CHEBI:10055 (1)
CHEBI:101085 (1)

Metabolite Name

(+)-8'-hydroxyabscisic acid (1)
(-)-11-hydroxy-9,10-dihydrojasmonic acid 11-beta-d-glucoside (1)
(-)-lupinine (1)
(11z,14z)-eicosadienoylcarnitine (1)
(1s,2r)-1,2-dihydrodibenzo[b,d]thiophene-1,2-diol (1)
(1s,2r,3s,5s,6s,16e,18e,20r,21s)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,16-trimethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl 2-methylpropanoate (1)
(2,7-dimethyloctahydro-1h-cyclopenta[c]pyridin-4-yl)methanol (1)
(2e)-2-[(4z)-5-(methylsulfanyl)-4-penten-2-yn-1-ylidene]-1,6-dioxaspiro[4.4]non-3-ene (1)
(2r,3s)-2-methylcitric acid (1)
(2s,3r,4e,8e)-3-hydroxy-2-[methyl(stearoyl)amino]-4,8-octadecadien-1-yl hydrogen sulfate (1)
(2s,3s,4s,5r,6s)-6-(hydroxymethyl)-5-{[(2r,3s,4s,5r,6s)-3,4,5-trihydroxy-6-(hydroxymethyl)-5-{[(2r,3s,4r,5r,6s)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2h-pyran-2-yl]oxy}tetrahydro-2h-pyran-2-yl]oxy}tetrahydro-2h-pyran-2,3,4,5-tetrol (1)
(2s,4ar,4br,6as,12bs,12cs,14as)-2-(2-hydroxy-2-propanyl)-12b,12c-dimethyl-3,4,5,6,6a,7,12,12b,12c,13,14,14a-dodecahydro-2h-chromeno[5',6':6,7]indeno[1,2-b]indole-4a(4bh)-carbaldehyde (1)
(2s,4s)-4-amino-2-hydroxy-2-methylpentanedioic acid (1)
(2s,4s)-pinnatanine (1)
(2z)-3-{5-[(4z)-5-(methylsulfanyl)-4-penten-2-yn-1-yl]-2-furyl}acrylaldehyde (1)
(2z,4z)-2-hydroxyhexa-2,4-dienoic acid (1)
(3-methyl-2-butenyl)-benzene (1)
(3s,5r,6s,7e,9x)-7-megastigmene-3,6,9-triol 9-glucoside (1)
(4-methylphenyl)acetaldehyde (1)
(4e,6e,d14:2) sphingosine (1)
(7s)-7-{[(2s)-9-hydroxy-2-isobutyl-3-oxo-2,3,9,9a-tetrahydro-1h-imidazo[1,2-a]indol-9-yl]methyl}-6,7-dihydroquinazolino[3,2-a][1,4]benzodiazepine-5,13-dione (1)
(9e,15e)-heptadec-9,15-trien-11,13-diyn-4-one (1)
(?)-2-methylthiazolidine (1)
(S)-(-)-Perillyl alcohol (1)
(ac)2-l-lys-d-ala (1)
(r)-n-methylsalsolinol (1)
(r)-pelletierine (1)
(s)-3-octanol glucoside (1)
(s)-5'-deoxy-5'-(methylsulfinyl)adenosine (1)
(s)-menthone 8-thioacetate (1)

First Public Date

2014 (1)

Classification

bacteria (1)

Study type

Transcription profiling by array (4)
RNA-seq of coding RNA (3)
Comparative genomic hybridization by array (1)
Other (1)
ChIP-seq (1)

Release Date

2025 (169)
2022 (153)
2021 (131)
2024 (121)
2023 (118)
2020 (90)
2019 (61)
2017 (35)
2018 (34)
2016 (31)
2015 (24)
2014 (21)
2026 (17)
2013 (13)
2012 (12)
2011 (12)
2010 (5)
2009 (3)
2008 (1)

Lab affiliation

Department of Biochemistry and Molecular Biology, Health Science Center, Ningbo University, Fenghua Road No.818, Ningbo, 315211, China. (1)
Guangzhou University of Chinese Medicine (1)
Institute of Agricultural Equipment, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China (1)
Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences.Shenzhen 518055，China (1)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, Dongdan Santiao 5 #, Dongcheng district, Beijing 100005, China. (1)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, Dongdan Santiao 5#, Dongcheng district, Beijing 100005, China (1)
Program for Cancer and Cell Biology, Department of Human Anatomy, Histology and Embryology, and PKU International Cancer Institute, Peking University Health Science Center, #38 Xue Yuan Road, Beijing 100191, China. (1)
Shenzhen University, China (1)
The First Affiliated Hospital of Guangxi Medical University (1)
The First Affiliated Hospital of Jinan University (1)

Tags

xref:PubMed:21345178 (1)
pathogen:bacterium (1)
pathogen (1)

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Efficacy and long-term effects of the intervention of Zhan Zhuang Qigong on Pisa syndrome in Parkinson's disease: the study protocol for a randomised control trial.

Not available

S-EPMC11529775 | biostudies-literature

PRODH regultes naive pluripotency by influencing mitochondrial oxidative phosphorylation (Untargeted metabolomics)

Naïve human embryonic stem cells (hESCs) that resemble the pre-implantation epiblasts are fueled by a combination of aerobic glycolysis and oxidative phosphorylation, but their mitochondrial regulators are poorly understood. Here we report that, proline dehydrogenase (PRODH), a mitochondria-local...

2024-02-12 | MTBLS7840 | MetaboLights

Balanced sparse model for tight frames in compressed sensing magnetic resonance imaging.

Not available

S-EPMC4388626 | biostudies-literature

Proteomic analysis reveals critical immunomolecular mechanisms in macrophage anti-tuberculosis processes

Tuberculosis infection activates the autoimmune system. However, the role of autoimmunity after Mycobacterium tuberculosis infection is unclear. In this study, liquid chromatography-tandem mass spectrometry (LC-MS/MS) combined with tandem mass spectrometry (TMT) was used to perform proteomic analysi...

ORGANISM(S): Homo sapiens (Human)

2021-01-04 | PXD022541 | Pride