Zhang Niu N - OmicsDI

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Unknown (1048)
Proteomics (53)
Transcriptomics (10)
Metabolomics (7)

Organisms

Homo sapiens (29)
Mus musculus (13)
Arabidopsis thaliana (3)
Saccharomyces cerevisiae (3)
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Anaplasma phagocytophilum (1)
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Panonychus citri (1)
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Nanorana parkeri (1)
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Repository

pride (38)
iProX (15)
biostudies-arrayexpress (10)
MetaboLights (7)

Tissue

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Disease

Alzheimer's disease (3)
Cervical cancer (3)
Alzheimer's disease 3 (1)
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Technology Type

Mass Spectrometry (38)
Shotgun proteomics (19)
Mass spectrometry (6)
Bottom-up proteomics (6)
Affinity purification coupled with mass spectrometry proteomics (5)
Data-dependent acquisition (5)
Top-down proteomics (3)
Affinity proteomics (2)
Olink affinity proteomics (2)
NMR spectroscopy (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
Gel-based experiment (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - positive - reverse phase (4)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Bruker (1)
Gas Chromatography MS - (1)

Publication Date

2025 (10)
2023 (10)
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2022 (9)
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2019 (4)
2015 (3)
2013 (2)
2020 (2)
2018 (2)
2016 (1)
2012 (1)
2011 (1)
2010 (1)
2005 (1)
2017 (1)

CHEBI ID

CHEBI:15891 (5)
CHEBI:15756 (4)
CHEBI:16335 (4)
CHEBI:16347 (4)
CHEBI:16704 (4)
CHEBI:16708 (4)
CHEBI:16737 (4)
CHEBI:16811 (4)
CHEBI:16857 (4)
CHEBI:16919 (4)
CHEBI:17368 (4)
CHEBI:17562 (4)
CHEBI:17596 (4)
CHEBI:17750 (4)
CHEBI:20067 (4)
CHEBI:29016 (4)
CHEBI:14336 (3)
CHEBI:15354 (3)
CHEBI:15728 (3)
CHEBI:15971 (3)
CHEBI:15996 (3)
CHEBI:16027 (3)
CHEBI:16040 (3)
CHEBI:16196 (3)
CHEBI:16344 (3)
CHEBI:16375 (3)
CHEBI:16437 (3)
CHEBI:16556 (3)
CHEBI:16576 (3)
CHEBI:16750 (3)

Metabolite Name

Cytidine (3)
Ergothioneine (3)
Glutathione (3)
Guanosine (3)
Stearic acid (3)
Sucrose (3)
Taurine (3)
1-(4-Methoxyphenyl)-2-propanone (2)
12-HETE (2)
12-Hydroxydodecanoic acid (2)
17-beta-Estradiol-3,17-beta-sulfate (2)
2-(S-Glutathionyl)acetyl chloride (2)
2-Isopropylmalic acid (2)
2-aminoisobutyric acid (2)
3-Dehydrosphinganine (2)
3-Indolepropionic acid (2)
3-Methyl-2-oxobutanoic acid (2)
3-Methylhistidine (2)
3-Methylindole (2)
3-Oxotetradecanoyl-CoA (2)
3-Oxovalproic acid (2)
3-Phosphoadenylylselenate (2)
3-Succinoylpyridine (2)
3-Sulfinylpyruvic acid (2)
3-carboxy-4-methyl-5-pentyl-2-furanpropanoic acid (2)
4-Hydroxyphenylacetylglutamine (2)
5'-Methylthioadenosine (2)
5-Acetylamino-6-formylamino-3-methyluracil (2)
5-Aminolevulinic acid (2)
5-Diphosphoinositol pentakisphosphate (2)

Modification

Not available (1)

Study type

RNA-seq of coding RNA (5)
Transcription profiling by array (3)
Comparative genomic hybridization by array (1)
Other (1)

Release Date

2025 (157)
2023 (140)
2022 (135)
2024 (118)
2021 (108)
2020 (93)
2019 (75)
2017 (42)
2018 (38)
2015 (36)
2016 (31)
2026 (28)
2013 (14)
2014 (12)
2011 (11)
2012 (8)
2009 (5)
2010 (3)
2005 (1)
2008 (1)
2006 (1)
2004 (1)

Lab affiliation

Tianjin Medical University (4)
St. Jude Children's Research Hospital (3)
Institute of Biophysics, Chinese Academy of Sciences (2)
The First Affiliated Hospital of Fujian Medical University (2)
1Institute of Biomedical Engineering, College of Life Sciences, Qingdao University, Qingdao 266071, P. R. China (1)
Cancer Stem Cell and Translation Medicine Lab, Innovative Cancer Drug Research and Development Engineering Center of Liaoning Province, Department of Oncology, Shengjing Hospital of China Medical University, Shenyang, 110004, China (1)
College of Agriculture/Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland, Yangtze University, Jingzhou, Hubei 434025, China (1)
Department of Dermatology, The First Affiliated Hospital of China Medical University, Shenyang, China (1)
Department of Life Sciences, Dezhou University, Dezhou, China. (1)
Department of Molecular Immunology, Institute of Basic Medical Sciences (1)
Department of Molecular and Cellular Biochemistry, Indiana University, Bloomington, IN, 47405 (1)
Department of Radiation Oncology, Zhongshan Hospital, Fudan University (1)
Departments of Structural Biology and Developmental Neurobiology, Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (1)
Harvard Medical School, Department of Biological Chemistry & Molecular Pharmacology (1)
Head, Section on Nutrient Control of Gene Expression Building 6, Room 230 6 Center Drive Bethesda, MD 20892 Phone: 301-496-4480 (1)
Huazhong Agricultural University (1)
Insititute of Animal Sciences,Chinese Academy of Agricultural Sciences (1)
Institute of Animal Sciences, Chinese Academy of Agricultural Sciences (1)
Junmin Peng, PhD, Member (Professor) Structural Biology & Developmental Neurobiology Director, Center for Proteomics and Metabolomics St. Jude Children's Research Hospital 262 Danny Thomas Place Memphis, TN 38105-3678 (1)
Key Laboratory of Protein and Peptide Pharmaceuticals & Laboratory of Proteomics, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China (1)
Lanzhou University, Lanzhou, Gansu, China (1)
Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University (1)
NIH Distinguished Investigator Section on Nutrient Control of Gene Expression Building 6, Room 230 6 Center Drive Bethesda, MD 20892 Phone: 301-496-4480 (1)
Nanjing University, Nanjing 210023, China (1)
Peking University (1)
School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, Japan (1)
Shanghai Institute of Thoracic Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai 200030 (1)
Southern University of Science and Technology (1)
St Jude Children's Research Hospital (1)
St. Jude Children’s Research Hospital (1)

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Chromosome-Level Genome Assembly of Anthidium xuezhongi Niu & Zhu, 2020 (Hymenoptera: Apoidea: Megachilidae: Anthidiini).

Not available

S-EPMC8850706 | biostudies-literature

Quantitative proteomic and phosphoproteomic analysis of the liver of the Xizang plateau frog

Protein abundance changes and reversible protein phosphorylation (RPP) play important roles in regulating hypometabolism but have never been documented in overwintering frogs at high altitudes. To test the hypothesis that protein abundance and protein phosphorylation change in response to winter hib...

ORGANISM(S): Nanorana parkeri

2024-05-22 | PXD042165 | Pride

Squamarina (lichenised fungi) species described from China belong to at least three unrelated genera.

Not available

S-EPMC7195383 | biostudies-literature

Deciphering the Role of N-Acetyltransferase 10 in Thalamic Hemorrhage Through Integrative Multi-Omics and Experimental Validation

Thalamic hemorrhage (TH) is a severe neurological condition, the molecular mechanisms of which are poorly understood, particularly in clinical settings. N-acetyltransferase 10 (NAT10), a regulator of RNA N4-acetylcytidine (ac4C) modification, has been implicated in cell cycle regulation and ident...

2025-11-18 | MTBLS11752 | MetaboLights

Analysis of differentially expressed genes in individuals with noninfectious uveitis based on data in the gene expression omnibus database.

Not available

S-EPMC9575823 | biostudies-literature

RPA promotes processive ssDNA digestion by Dna2 via their bimodal interaction in Saccharomyces cerevisiae

Single-stranded DNA (ssDNA) widely exists as intermediates in DNA metabolic pathways. The ssDNA binding protein, RPA, not only protects the integrity of ssDNA, but also directs the downstream factor that signals or repairs the ssDNA intermediate. However, it remains unclear how these enzymes/factors...

ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast)

2022-02-22 | PXD028637 | Pride

Ssdna Saccharomyces cerevisiae Dna2 Rpa

Bis[N'-(3-cyano-benzyl-idene)isonicotino-hydrazide-κN]silver(I) trifluoro-methane-sulfonate.

Not available

S-EPMC2971296 | biostudies-literature

Bis[N'-(3-cyano-benzyl-idene)isonicotino-hydrazide]silver(I) trifluoro-acetate.

Not available

S-EPMC2970130 | biostudies-literature

Monocyclic Bis(<i>N</i>‑nitramine) Triazole: A High-Density Energetic Material with Exceptionally Weak N-N Bond.

Not available

S-EPMC12308370 | biostudies-literature

Urine metabolomics phenotyping and urinary biomarker exploratory in mild cognitive impairment and Alzheimer's disease.

INTRODUCTION Alzheimer's disease is a prevalent disease with a heavy global burden and is suggested to be a metabolic disease in the brain in recent years. The metabolome is considered to be the most promising phenotype which reflects changes in genetic, transcript, and protein ...

2024-01-11 | MTBLS8662 | MetaboLights

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1118 Results

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INTRODUCTION Alzheimer's disease is a prevalent disease with a heavy global burden and is suggested to be a metabolic disease in the brain in recent years. The metabolome is considered to be the most promising phenotype which reflects changes in genetic, transcript, and protein ...

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