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Metabolomicsliquid chromatography-mass spectrometry
Bacterial cells harvested at peak enzyme activity were subjected to untargeted metabolomic profiling to evaluate metabolic changes during straw degradation compared to control (CK) groups. Samples were extracted using pre-chilled methanol–water (4:1, v/v) and analyzed on a UHPLC-Q Exactive HF-X syst...
2026-08-24 | MTBLS15412 | MetaboLights
MetabolomicsSymbiotic bacteria-derived organic acids protect Delia antiqua larvae from entomopathogenic fungal infection

The protection of associated microbiota for their animal hosts against pathogen infection has been studied widely over the last 100 years. However, how those microbes protect the animal host is limitedly investigated. In former studies, body surface microbes of one insect, Delia antiqua,...

2020-11-12 | MTBLS2074 | MetaboLights
UnknownDevelopment and Validation of a Polygenic Risk Score for Stroke in the Chinese Population.
Not available
S-EPMC8424497 | biostudies-literature
TranscriptomicsTranscriptome sequencing of naked mole rat, Heterocephalus glaber
Deep sequencing of mRNA from naked mole rat Analysis of ploy(A)+ RNA of different specimens: brain, kidney, liver from new born , 4 years old , 20 years old and 4 years old hypoxia-exposed naked mole rat
ORGANISM(S): Heterocephalus glaber 
2011-10-12 | E-GEOD-30337 | biostudies-arrayexpress
ProteomicsHigh-Abundance Protein-Guided Hybrid Spectral Library for Data-Independent Acquisition Metaproteomics
Metaproteomics offers a direct avenue to identify microbial proteins in microbiota, enabling compositional and functional characterization of microbiota. Due to the complexity and heterogeneity of microbial communities, in-depth and accurate metaproteomics faces tremendous limitations. One challenge...
ORGANISM(S): Morganella Morganii Clostridium Butyricum Lactobacillus Acidophilus Enterococcus Faecalis Feces Metagenome Enterobacter Asburiae Pseudomonas Aeruginosa 
2023-07-19 | PXD043890 |
ProteomicsDeepFLR Facilitates False Localization Rate Control in Phosphoproteomics
Site-specific phosphorylation events affect nearly all the cellular processes and correct phosphosite localization plays an important role in biological or medical health studies. However, direct false localization rate (FLR) control remains challenging in phosphoproteomics. Here, we propose DeepFLR...
ORGANISM(S): Homo Sapiens 
2023-04-04 | PXD037580 |
ProteomicsAccurate Taxonomic Annotation from Metagenomic Data for Deep Metaproteomic Coverage of Microbiota
We developed an accurate taxonomic annotation strategy from metagenomic data for deep metaproteomic coverage, and also compared the performance of the state-of-the-art LC-MS/MS techniques using a simulated microbial community with 12 species. In addition, we also achieved deep proteome coverage of h...
ORGANISM(S): Enterococcus Faecalis Escherichia Coli Atcc 25922 Pseudomonas Aeruginosa Klebsiella Pneumoniae Homo Sapiens Enterococcus Casseliflavus Morganella Morganii Lactobacillus Acidophilus Clostridium Butyricum Citrobacter Freundii Complex Enterobacter Asburiae Klebsiella Aerogenes Bacteroides Fragilis 
PXD034815 |
ProteomicsIdentification of proteins associated with IFN-γR2 in macrophages
Department of Immunology & Center for Immunotherapy
ORGANISM(S): Mus Musculus 
PXD011572 |
ProteomicsSpin-driven Enantioselective Regulation of Cyclooxygenase-2 Activity for Rheumatoid Arthritis Therapy via Chiral Gold Nanohelices
Electron-spin dynamics represent an unexplored dimension in enzymatic catalysis, where most regulatory strategies focus on modulating active-site chemistry. Here, we present a spintronic approach that employs chiral gold nanohelices (CAu) as electron spin polarizers to enantiospecifically modulate c...
ORGANISM(S): Mus Musculus 
PXD076742 |
ProteomicsIdentification of ATP9A interactors in 293T cell line
Macropinocytosis is an effective strategy against nutrient starvation, which fuels cancer cells grow in nutrient-limited conditions. However, whether and how macropinocytosis contributes to the rapid proliferation of hepatocellular carcinoma cells that frequently exhibit inadequate nutrient supply r...
ORGANISM(S): Homo Sapiens 
2022-12-13 | PXD038797 |
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