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ProteomicsQuantitative proteomics of coeliac gut during 14-day gluten challenge: low-level baseline inflammation despite clinical and histological normality predicts subsequent response
Coeliac disease is a small intestinal disorder caused by an abarrent immune response towards dietary gluten due to activation of pro-inflammatory gluten specific CD4+ T cells. Histological evaluation and classification of gluten induced musosal changes is part of the diagnostic work up. of adults. ...
ORGANISM(S): Homo sapiens (Human) 
2021-03-03 | PXD018977 | Pride
Coeliac disese Lc-msms Proteomics Human intestine Ffpe Laser capture microdissection Gluten challenge 
ProteomicsProteomic comparison of Biomphalaria glabrata excretory-secretory proteins at different time-points of Schistosoma mansoni infection
Schistosomiasis, caused by infection with Schistosoma trematode parasites, is one of the deadliest neglected tropical diseases in the world. The Schistosoma lifecycle involves the miracidia infection of an intermediate molluscan host, such as Biomphalaria glabrata. Dispersing B. glabrata attractant ...
ORGANISM(S): Biomphalaria glabrata Schistosoma mansoni (Blood fluke) 
2022-10-03 | PXD031989 | Pride
Biomphalaria glabrata Excretory-secretory proteins Schistosoma mansoni Lc-ms/ms 
ProteomicsSpecialisation of meiotic kinetochores revealed through a synthetic spindle assembly checkpoint strategy.
Meiosis creates haploid gametes through two sequential M phases. While many studies have focused on meiosis I, the molecular events which drive and define meiosis II are largely unknown. Here, we report a novel cell synchronization strategy which allows for collection of yeast cells arrested at meta...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2026-03-04 | PXD067911 | Pride
ProteomicsFITC labeling in tumor cell(red light/ultrasound)
For more information, please refer to the method section of the paper
ORGANISM(S): Mus musculus (Mouse) 
2025-07-30 | PXD065410 | Pride
Proximity labeling 4t1 
ProteomicsSite-specific N-glycosylation analysis of recombinant FCγ receptor from human and mice.
Site-specific glycosylation analysis by nLC-MS/MS of recombinant human FCγ receptor I, III V158 and III 158F, and mouse FCγ receptor I, III and IV.
ORGANISM(S): Mus musculus (Mouse) Homo sapiens (Human) 
2024-05-21 | PXD043966 | Pride
N-glycosylation  mass spectrometry  glycoproteomic  fcγ receptor Relative abundance 
ProteomicsSLAPSHOT reveals rapid dynamics of extracellularly exposed proteome in response to calcium-activated plasma membrane phospholipid scrambling
To facilitate our understanding of the often rapid and nuanced dynamics of extracellularly exposed proteomes during signaling events, it is important to devise robust workflows affording fast time resolution without biases and confounding factors. Here, we present Surface-exposed protein Labeling u...
ORGANISM(S): Homo sapiens (Human) 
2024-08-29 | PXD041387 | Pride
Calcium signaling Surface proteomics Lc-msms Isobaric labeling Phospholipid scrambling 
ProteomicsProtein-RNA interaction dynamics downstream of KRAS activation reveals key regulators of oncogenic KRAS driven cancers.
Oncogenic KRAS mutations rewires cellular signaling, leading to significant alterations in gene expression. RNA-binding proteins (RBPs) play a pivotal role in gene expression regulation by post-transcriptionally controlling various aspects of RNA metabolism. It becomes clear that interactions betw...
ORGANISM(S): Homo sapiens (Human) 
2025-05-07 | PXD053310 | Pride
Human Lung Rbp 
ProteomicsProteomic analysis of amniotic fluids from healthy mid-gestation pregnancy
Amniotic fluid (AF) reflects fetal and placental physiology and provides a valuable window into intrauterine development. However, the extent to which fetal sex influences the mid-gestation AF proteome remains poorly characterized. The present study applied a data-independent acquisition mass spectr...
ORGANISM(S): Homo sapiens (Human) 
2026-05-06 | PXD077489 | Pride
Sex differences Proteomics Amniotic fluids 
ProteomicsESCRT complexes in Giardia intestinalis (CHMP7)
To access ESCRT subunit presence, distribution and main interactors, we performed iterative co-immunoprecipitation on recombinant Giardia subunits.
ORGANISM(S): Giardia lamblia ATCC 50803 
2021-04-10 | PXD016487 | Pride
Giardia Coip Escrt 
ProteomicsRNAPII interactome in INTS6 KO and WT cells
In this study we show that INTS6 KO remodels the RNAPII interactome and enhances ARMC5 binding. To investigate how INTS6 affects RNAPII function, we determined the RNAPII interactome in the presence and absence of INTS6 using Ints6 KO cells. Chromatin fractions from WT and INTS6 KO cells, with or wi...
ORGANISM(S): Homo sapiens (Human) 
2025-12-22 | PXD053346 | Pride
Transcription Ints6 Chromatin Rna-polymerase ii 
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