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UnknownPeptide labeling with isobaric tags yields higher identification rates using iTRAQ 4-plex compared to TMT 6-plex and iTRAQ 8-plex on LTQ Orbitrap.
Not available
S-EPMC3093924 | biostudies-literature
ProteomicsiTRAQ labeling is superior to mTRAQ for quantitative global proteomics and phosphoproteomics
Mertins P, Udeshi ND, Clauser KR, Mani DR, Patel J, Ong, SE, Jaffe JD, Carr SA. Mol Cell Proteomics 2012, mcp.M111.014423. doi:10.1074/mcp.M111.014423. Tranche_hash:5cHw5Rj36vYNshNpy8k4nojtPyW27N/FHcImna3+zw4QV6KIlLOg3i6zesWBdWkEX608MEgdxWuVyKvvdOgB9BAanesAAAAAAACEzw==
2013-11-20 | MSV000078495 | MassIVE
UnknownOptimization of protein-level tandem mass tag (TMT) labeling conditions in complex samples with top-down proteomics.
Not available
S-EPMC9371347 | biostudies-literature
UnknownQuantitative Top-Down Proteomics in Complex Samples Using Protein-Level Tandem Mass Tag Labeling.
Not available
S-EPMC8323476 | biostudies-literature
UnknownIsobaric protein-level labeling strategy for serum glycoprotein quantification analysis by liquid chromatography-tandem mass spectrometry.
Not available
S-EPMC3690282 | biostudies-literature
ProteomicsOptimization of Higher-Energy Collisional Dissociation Fragmentation Energies for Intact Protein-level Tandem Mass Tag Labeling
Isobaric chemical tag labeling (e.g., iTRAQ and TMT) is a commonly used approach in quantitative proteomics research. Typically, peptides are covalently labeled with isobaric chemical tags, and quantification is enabled through detection of low-mass reporter ions generated after MS2 fragmentation. R...
ORGANISM(S): Homo sapiens (Human) 
2023-01-17 | PXD037491 | Pride
Protein-level tmt labeling  top-down proteomics  quantitative proteomics  hcd 
UnknownSelective Maleylation-Directed Isobaric Peptide Termini Labeling for Accurate Proteome Quantification.
Not available
S-EPMC7271076 | biostudies-literature
ProteomicsLocal translation of mitochondrial proteins at the synapse, LFQ expriment
To systematically explore the dynamics of the synaptic proteome upon neuronal stimulation we employed a simple model system which is based on isolated synaptoeurosomes (SN). Synaptoneurosomes are preparations freshly obtained from the brain and enriched in synapses, containing both pre and postsyna...
ORGANISM(S): Mus musculus (Mouse) 
2020-08-12 | PXD012746 | Pride
Local translation Synaptosomes Quantitative proteomics 
ProteomicsLocal translation of mitochondrial proteins at the synapse
To systematically explore the dynamics of the synaptic proteome upon neuronal stimulation we employed a simple model system which is based on isolated synaptoeurosomes (SN). Synaptoneurosomes are preparations freshly obtained from the brain and enriched in synapses, containing both pre and postsyna...
ORGANISM(S): Mus musculus (Mouse) 
2020-08-12 | PXD012707 | Pride
Local translation Synaptosomes Quantitative proteomics 
ProteomicsTKO6: A Peptide Standard to Assess Interference for Unit-Resolved Isobaric Labeling Platforms
Protein abundance profiling using isobaric labeling is a well-established quantitative mass spectrometry technique. However, ratio distortion resulting from co-isolated and co-fragmented ions - commonly referred to as interference - remains a caveat of this technique. Tribrid mass spectrometers, suc...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2019-03-07 | PXD011653 | Pride
Tko  interference  tmt  itraq  sps-ms3 
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