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TranscriptomicsTranscription profiling of human HUVEC (Human Umbilical Vein Endothelial Cells) cells exposed to heat shock (42 degrees Celcius) for different time points (1hr, 3 hrs, 6 hr and 12 hrs) and vs non heat-shock cells with varying amounts of external spikes added
HUVEC (Human Umbilical Vein Endothelial Cells) cells were exposed to heat shock (42 degrees Celcius) for different time points (1hr, 3 hrs, 6 hr and 12 hrs) and compared to non heat-shock cells. External normalization controls were added in equal amounts to equivalent amounts of total RNA.
ORGANISM(S): Homo sapiens 
2003-04-01 | E-UMCU-2 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wild type vs wild type yeast with controls spiked in different ratios; 1:1, 1:2 and 1:10 respectively
Wild type versus wildtype Saccharomyces cerevisiae experiment with controls spiked in different ratios; 1:1, 1:2 and 1:10 respectively
ORGANISM(S): Saccharomyces cerevisiae 
2003-04-01 | E-UMCU-1 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of yeast cells grown into stationary phase compared with exponential mid-log grown cells including a dye-swap
S. cerevisiae cells grown into stationary phase were compared with exponential mid-log grown cells including a dye-swap. External normalization controls were added in equal amounts to equivalent amounts of total RNA.
ORGANISM(S): Saccharomyces cerevisiae 
2003-04-01 | E-UMCU-4 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of MCF7 (human mammary gland adenocarcinoma) cells deprived of serum for 30 hrs and vs non-deprived cells to test spike based normalization
MCF7 (human mammary gland adenocarcinoma) cells were deprived of serum for 30 hrs and were compared to non-deprived cells. External normalization controls were added in equal amounts to equivalent amounts of total RNA.
ORGANISM(S): Homo sapiens 
2003-04-01 | E-UMCU-3 | biostudies-arrayexpress
TranscriptomicsStationary phase timecourse
Nine day glucose starvation stationary phase culture, exit and entry from quiescence
ORGANISM(S): Saccharomyces cerevisiae 
2005-04-15 | E-UMCU-12 | biostudies-arrayexpress
TranscriptomicsDeletion mutant analysis of established glucose signaling and metabolic pathway members in Saccharomyces cerevisiae
To understand the organisation of the glucose regulatory system, we analysed 91 deletion mutants of established glucose signalling and metabolic pathway members in Saccharomyces cerevisiae by DNA microarrays. These deletion mutants do not induce pathway-specific transcriptional responses reflecting ...
ORGANISM(S): Saccharomyces cerevisiae 
2012-06-17 | E-GEOD-33097 | biostudies-arrayexpress
TranscriptomicsGlucose-depletion time-course experiment in Saccharomyces cerevisiae wild-type cells.
To investigate the glucose regulatory system in Saccharomyces cerevisiae, we conducted a time-course in which glucose-depleted wildtype (WT) cells were inoculated into fresh media (SC, 2% glucose). Their subsequent transcriptional output was monitored over a period of five hours by DNA microarrays: ...
ORGANISM(S): Saccharomyces cerevisiae 
2012-06-17 | E-GEOD-33098 | biostudies-arrayexpress
TranscriptomicsPairwise comparison stationary phase vs mid-log
A pairwise comparison was performed between stationary phase specific samples and mid-log samples using four replicates and dye-swaps
ORGANISM(S): Saccharomyces cerevisiae 
2005-04-15 | E-UMCU-13 | biostudies-arrayexpress
TranscriptomicscDNA microarray profiles of canine mammary tumour cell lines reveal deregulated pathways pertaining to their phenotype
Mammary cancer is the most common type of cancer in female dogs with a lifetime risk of over 24% when dogs are not spayed. The elucidation of the complete canine genome opens new areas for development of cancer therapies. These should be tested first by in vitro models such as cell lines. However, t...
ORGANISM(S): Canis lupus familiaris 
2007-09-01 | E-GEOD-7659 | biostudies-arrayexpress
TranscriptomicsSlx5_Slx8_Genome_Stability
The Saccharomyces cerevisiae Slx5/8 complex is the founding member of a recently defined class of ubiquitin ligases (STUbLs) that target sumoylated substrates. Slx5/8 has been implicated in genome stability and transcription, but the precise contribution to these processes is not clear. To character...
ORGANISM(S): Saccharomyces cerevisiae 
2013-08-06 | E-GEOD-33929 | biostudies-arrayexpress
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