Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

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Transcription profiling of wild type mouse embryonic fibroblasts treated with interferon to study interferon-regulated gene expression.


ABSTRACT: A number of IFN-induced proteins are believed to be responsible for the antiviral state induced by IFNs. Our microarray analysis of IFN-regulated genes in MEFs from wild-type mice identified 124 probe sets that were differentially regulated upon IFN treatment. This group consisted of many known ISGs such as Ifit1, Gbp2, mx1, Isg15, Stat1, nmi, mx2, If204, Adar, Irf1, and protein kinase R. Experiment Overall Design: 3 control and 3 IFNb-treated biological replicates were analyzed.

ORGANISM(S): Mus musculus

SUBMITTER: Lawrence Pfeffer 

PROVIDER: E-GEOD-3400 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Role of nuclear factor-kappaB in the antiviral action of interferon and interferon-regulated gene expression.

Pfeffer Lawrence M LM   Kim Jong-Gwan JG   Pfeffer Susan R SR   Carrigan Dennis J DJ   Baker Darren P DP   Wei Lai L   Homayouni Ramin R  

The Journal of biological chemistry 20040506 30


Interferons (IFNs) play critical roles in host defense by modulating the expression of various genes via tyrosine phosphorylation of STAT transcription factors. IFN-alpha/beta activates another important transcription factor, nuclear factor-kappaB (NF-kappaB), but its role in IFN-mediated activity is poorly understood. Sensitivity to the antiviral and gene-inducing effects of IFN was examined in normal fibroblasts and in NF-kappaB knockout fibroblasts from p50- and p65-null mice. Antiviral assay  ...[more]

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