Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

The CodY Regulon in Streptoccus mutans


ABSTRACT: In this report, codY mutant strains were constructed and used to demonstrate the relationship of (p)ppGpp synthesized by RelP and RelQ with the activation of CodY. In addition, because CodY has not been studied in S. mutans, we used microarrays to demonstrate that this protein function as a global regulator of gene expression in S. mutans. Keywords: stress response, gene knockout analysis For microarray analysis, cells were grown in complete FMC to an optical density at 600 nm (OD600) of 0.3 collected by centrifugation, quick frozen in a dry-ice/ethanol bath, and stored at - 80â??C for RNA isolation. RNA was isolated from exponential phase (OD600 0.3), as described previously. All samples were digested with DNase I (Ambion, Austin, TX) and purified using the RNeasy mini kit column (Q

ORGANISM(S): Streptococcus mutans

SUBMITTER: Robert Burne 

PROVIDER: E-GEOD-9641 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress