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Rapid screening of cellular stress responses in recombinant Pichia pastoris strains using metabolite profiling.


ABSTRACT: Heterologous protein production in the yeast Pichia pastoris can be limited by biological responses to high expression levels; the unfolded protein response (UPR) is a key determinant of the success of protein production in this organism. Here, we used untargeted NMR metabolic profiling (metabolomics) of a number of different recombinant strains, carried out in a miniaturized format suitable for screening-level experiments. We identified a number of metabolites (from both cell extracts and supernatants) which correlated well with UPR-relevant gene transcripts, and so could be potential biomarkers for future high-throughput screening of large numbers of P. pastoris clones.

SUBMITTER: Tredwell GD 

PROVIDER: S-EPMC5329079 | biostudies-literature | 2017 Mar

REPOSITORIES: biostudies-literature

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Rapid screening of cellular stress responses in recombinant Pichia pastoris strains using metabolite profiling.

Tredwell Gregory D GD   Aw Rochelle R   Edwards-Jones Bryn B   Leak David J DJ   Bundy Jacob G JG  

Journal of industrial microbiology & biotechnology 20170203 3


Heterologous protein production in the yeast Pichia pastoris can be limited by biological responses to high expression levels; the unfolded protein response (UPR) is a key determinant of the success of protein production in this organism. Here, we used untargeted NMR metabolic profiling (metabolomics) of a number of different recombinant strains, carried out in a miniaturized format suitable for screening-level experiments. We identified a number of metabolites (from both cell extracts and super  ...[more]

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