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ProteomicsInvestigation on the quantitative proteomic responses of bloom-forming Cyanobacteria Microcystis aeruginosa to phosphorus depletion and starvation by the method of isobaric tags for relative and absolute quantitation (iTRAQ)
Microcystis aeruginosa cells were treated with phosphorus repletion, depletion and starvation. Isobaric tags for relative and absolute quantitation (iTRAQ) proteomic method was employed to explore to the effects of phosphorus limitation on Microcystis aeruginosa cells at the protein level. This inve...
ORGANISM(S): Microcystis aeruginosa 
2021-06-29 | PXD025188 | Pride
Microcystis aeruginosa Phosphorus Itraq 
ProteomicsSurfactant and chaotropic agent assisted sequential extraction/on pellet digestion (SCAD) for enhanced proteomics
As a popular sample preparation approach, Filter-aided sample preparation (FASP) has been widely used in proteomic analysis. However, several limitations have been noted, including sample loss during filtration, repetitive centrifugation steps, and the possibility of breakage of filtration membrane....
ORGANISM(S): Homo sapiens (Human) 
2018-10-19 | PXD008967 | Pride
Urea Protein digestion Protein detection Protein extraction Peptide sequencing Lfq Scad Ibaq Fasp 
UnknownQuantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.
Not available
S-EPMC4349977 | biostudies-literature
ProteomicsNitric Oxide Enhances Resistance to PEG-induced Water Deficiency is Associated with the Primary Photosynthesis Reaction in Triticum aestivum L.
Photosynthesis is affected by water deficiency (WD) stress, and nitric oxide (NO) is a free radical that participates in the photosynthesis process. Previous studies have suggested that NO regulates the excitation energy distribution of photosynthesis under WD stress. Here, quantitative phosphoprote...
ORGANISM(S): Triticum aestivum (Wheat) 
2019-11-14 | PXD010724 | Pride
Nitric oxide  20% peg-induced water deficiency  phosphoproteomic  triticum aestivum l.  primary reaction of photosynthesis 
UnknownComparative evaluation of two methods for LC-MS/MS proteomic analysis of formalin fixed and paraffin embedded tissues.
Not available
S-EPMC7900714 | biostudies-literature
ProteomicsTurnover rates of human muscle proteins in vivo reported in fractional, mole and absolute units
Protein fractional turnover rates (FTR) represent measurements of flux through a protein pool, i.e. net abundance (ABD) of the protein. If protein abundance is not measured or is different between experimental conditions the interpretation of FTR data may be confounded. This project investi-gates th...
ORGANISM(S): Homo sapiens (Human) 
2025-06-05 | PXD046509 | Pride
Human muscle 
ProteomicsIntegrating Proteomics and Enzyme Kinetics Reveals Tissue-Specific Types of the Glycolytic and Gluconeogenic Pathways
Glycolysis is the core metabolic pathway supplying energy to cells. Whereas the vast majority of studies focus on specific aspects of the process, global analyses characterizing simultaneously all enzymes involved in the process are scarce. Here we demonstrate that quantitative label- and standard-f...
ORGANISM(S): Mus musculus (Mouse) 
2015-06-22 | PXD002156 | Pride
Gluconeogenesis Lysine acetylation Kcat -values Carbohydrate metabolism "total protein approach" Glycolysis Energy metabolism Quantitative proteomics "filter aided sample preparation" absolute protein quantitation 
ProteomicsDirhodium (II) Complex Interferes with Iron-Transport System to Exert Antibacterial Action against Streptococcus pneumoniae
Drug resistance in bacteria is becoming a significant threat to global public health, and the development of novel and efficient antibacterial compounds is urgently needed. Recently, rhodium complexes have attracted attention as antimicrobial agents, yet their antibacterial mechanism remains unknown...
ORGANISM(S): Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) 
2022-02-28 | PXD011667 | Pride
Antibacterial mechanism Streptococcus pneumoniae Haem-transport system piuabcd Itraq Dirhodium (ii) complex 
ProteomicsMultiplexed quantitative proteomics in mouse model of aging
Characterization of the heart proteome in a mouse model of aging
ORGANISM(S): Mus musculus (Mouse) 
2020-12-01 | PXD019533 | Pride
Mouse Heart Aging 
ProteomicsMultiplexed quantitative proteomics in a pig model of aging
Characterization of the heart proteome in a pig model of aging
ORGANISM(S): Sus scrofa domesticus (domestic pig) 
2020-12-01 | PXD019532 | Pride
Heart Aging Pig 
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