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MetabolomicsMulti-omics analysis reveals urea promoting Salix matsudana growth and facilitating soil remediation

In this manuscript, we monitored the growth of S. matsudana and measured the biomass of its various organs. Concurrently, we analyzed the rhizosphere metabolome and microbiome. The results demonstrated that urea application promotes both the growth of S. matsudana and the accu...

2025-09-09 | MTBLS12969 | MetaboLights
TranscriptomicsUnderstanding strategy of nitrate and urea assimilation in a Chinese strain of Aureococcus anophagefferens through RNA-seq analysis
Purpose: RNA-seq technology was used to profile the transcriptome of a Chinese strain of A. anophagefferens that was grown on urea, nitrate, and a mixture of urea and nitrate, and that was under N-replete, limited and recovery conditions to understand the molecular mechanisms that underlie nitrate a...
ORGANISM(S): Aureococcus anophagefferens 
2015-05-14 | E-GEOD-60576 | biostudies-arrayexpress
TranscriptomicsTranscriptional characterization of maize roots in response to urea and nitrate
Although urea is the most used nitrogen fertilizer worldwide, little is known on the capacity of crop plants to use urea per se as a nitrogen source for development and growth. To date, the molecular and physiological bases of its transport have been investigated only in a limited number of species....
ORGANISM(S): Zea mays 
2015-03-02 | E-GEOD-53102 | biostudies-arrayexpress
MetabolomicsAlterations in CSF Urea Occur in Late Manifest Stage Huntington Disease
Not available
ORGANISM(S): Homo sapiens 
ST002442 | MetabolomicsWorkbench
MetabolomicsUrea cycle and 1C/serine metabolism in the prevention of oxygen induced retinopathy
Not available
ORGANISM(S): Mus musculus 
ST001130 | MetabolomicsWorkbench
TranscriptomicsMetabolically engineered urea degrading and urea importing Sake yeast strains K7 (WT), K7 Dur1,2 and K7 Dur3
Excess/residual urea is a pervasion problem in wine and Sake fermentation. We sought to reduce residual urea levels (to reduce ethyl carbamate leves) by engineering the Sake yeast strain K7 to constitutively express either the urea amidolyase (Dur1,2) or urea importer (Dur3). We sought to then compa...
ORGANISM(S): Saccharomyces cerevisiae 
2010-05-07 | E-GEOD-17867 | biostudies-arrayexpress
TranscriptomicsTranscriptional responses of uropathogenic E. coli to stresses caused by sodium chloride or urea.
E. coli which cause urinary tract infections must respond to high osmolarity in the urinary tract as well as the presence of urea. We used microarrays to measure the differntial gene expression of uropathogenic strain CFT073 in conditions of high osmolarity of urea v. minimal media RNA was extracted...
ORGANISM(S): Escherichia coli CFT073 
2012-04-04 | E-GEOD-28399 | biostudies-arrayexpress
ProteomicsCharacterization of two urea-utilizing pathways in coral reef ecosystems: implications for the significance of the urea cycle in facing global warming
Urea can serve as nitrogen source for coral holobionts and plays a cruscial role in coral calcification, although the degradation of urea by coral symbionts is not fully understood. In this study, we investigated the urea utilized pathway and the responses of the Symbiodiniaceae family to urea under...
ORGANISM(S): Cladocopium goreaui 
2024-09-27 | PXD056312 | Pride
Urea Symbiodiniaceae Nitrogen environment Urease Coral calcification 
ProteomicsBifidobacterium longum subsp. infantis utilizes urea as a nitrogen source
Bifidobacterium longum subsp. infantis is a bacterial commensal that colonizes the breast-fed infant gut where it utilizes indigestible components delivered in human milk. Accordingly, human milk contains several non-protein nitrogenous molecules, including urea at high abundance. This project inves...
ORGANISM(S): Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) 
2023-03-22 | PXD019401 | Pride
Bifidobacteria  microbiota  human milk  microbiome  urea 
ProteomicsHepatic urea, creatinine and uric acid metabolism in dairy cows with divergent milk urea concentrations
Milk urea concentration is an indicator for dietary nitrogen (N)-supply and urinary nitrogen excretion. Dairy cows with high (HMU) compared to low milk urea (LMU) concentration have greater plasma urea, creatinine and uric acid concentrations, but if the liver metabolism accounts for these differenc...
ORGANISM(S): Bos taurus (Bovine) 
2022-09-27 | PXD033412 | Pride
Pcr Gel electrophoresis Proteomics Nitrogen excretion Purine 
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