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ProteomicsLarge-scale Proteomic and Phosphoproteomic Analysis of Maize Seedling Leaves During De-etiolation
De-etiolation consists of a series of developmental and physiological changes that a plant undergoes in response to light. During this process light, an important environmental signal, triggers the inhibition of mesocotyl elongation and the production of photosynthetically active chloroplasts, and e...
ORGANISM(S): Zea mays (Maize) 
2020-04-09 | PXD012897 | Pride
Maize seedling leaves  de-etiolation  proteome  phosphoproteome 
ProteomicsMacro-porous Reversed Phase Separation of Proteins Combined with Reversed Phase Separation of Phosphopeptides and Tandem Mass Spectrometry for Profiling the Phosphoproteome of MDA-MB-231 cells
A new method of combining macro-porous reversed phase (mRP) protein fractionation with reversed phase liquid chromatography (RPLC) peptide separation tandem mass spectrometry (MS/MS) is reported for profiling the phosphoproteome of a complex sample. In this method, an mRP-C18 column was used to frac...
ORGANISM(S): Homo sapiens (Human) 
2014-07-24 | PXD000948 | Pride
Phosphoproteome Mrp-rplc Scx-rplc Mda-mb-231 Mass spectrometry 
UnknownCasein phosphopeptides drastically increase the secretion of extracellular proteins in Aspergillus awamori. Proteomics studies reveal changes in the secretory pathway.
Not available
S-EPMC3283509 | biostudies-literature
UnknownMHC class I-associated phosphopeptides are the targets of memory-like immunity in leukemia.
Not available
S-EPMC4071620 | biostudies-literature
UnknownGel-based and gel-free identification of proteins and phosphopeptides during egg-to-larva transition in polychaete Neanthes arenaceodentata.
Not available
S-EPMC3376139 | biostudies-literature
UnknownPartial-, Double-Enzymatic Dephosphorylation and EndoGluC Hydrolysis as an Original Approach to Enhancing Identification of Casein Phosphopeptides (CPPs) by Mass Spectrometry.
Not available
S-EPMC8471704 | biostudies-literature
ProteomicsA systematic phosphoproteome screen to identify targets of the Target of Rapamycin (TOR) kinase in Arabidopsis thaliana
The target of rapamycin (TOR) kinase is a central regulatory hub that translates environmental and nutritional information into permissive or restrictive growth decisions. Although the TOR pathway is conserved among eukaryotes, plants developed unique adaptations to this pathway to cope with their a...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-07-17 | PXD008355 | Pride
Arabidopsis Sucrose Azd8055 Target of rapamycin (tor) Cell culture Label-free quantitative ms Phosphoproteomics Rapamycin 
UnknownSimultaneous Enrichment of Cysteine-containing Peptides and Phosphopeptides Using a Cysteine-specific Phosphonate Adaptable Tag (CysPAT) in Combination with titanium dioxide (TiO2) Chromatography.
Not available
S-EPMC5054350 | biostudies-literature
ProteomicsBuilding spectral libraries to analyze phosphopeptides in colorectal cancer organoids
The goal of this project was to build SWATH Spectral libraries to analyze phosphopeptides from colorectal cancer organoids.
ORGANISM(S): Homo sapiens (Human) 
2023-12-10 | PXD018862 | Pride
Organoids Colorectal cancer 
ProteomicsListeria monocytogenes phosphoproteomics
Phosphopeptides were identified in Listeria monocytogesn strain constitutivally expressing PrfA. Also, the phosphoproteins and proteins were identified that are overexpressed/underextressed in response to PrfA.
ORGANISM(S): Listeria monocytogenes EGD-e 
2014-10-29 | PXD001108 | Pride
Phosphoproteomics Orbitrap Lc-ms/ms 
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