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UnknownComparative Proteomics Enables Identification of Nonannotated Cold Shock Proteins in E. coli.
Not available
S-EPMC5647875 | biostudies-literature
UnknownComparative Membrane Proteomics Reveals a Nonannotated E. coli Heat Shock Protein.
Not available
S-EPMC5761644 | biostudies-literature
ProteomicsOptimized Sample Preparation Workflow for Improved Identification of Ghost Proteins
Large scale proteomic strategies rely on database interrogation. Thus, only referenced proteins can be identified. Recently, Alternative Proteins (AltProts) translated from nonannotated Alternative Open reading frame (AltORFs) were discovered using customized databases. Because of their small size w...
ORGANISM(S): Homo sapiens (Human) 
2021-02-15 | PXD024134 | Pride
Protein identification Fractionation Precipitation Peptides and proteins Extraction 
ProteomicsImproved Identification and Analysis of Small Open Reading Frame Encoded Polypeptides
Computational, genomic, and proteomic approaches have been used to discover nonannotated proteincoding small open reading frames (smORFs). Some novel smORFs have crucial biological roles in cells and organisms, which motivates the search for additional smORFs. Proteomic smORF discovery methods are a...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-06-26 | MSV000084014 | MassIVE
UnknownPositive-Unlabeled Learning for Pupylation Sites Prediction.
Not available
S-EPMC4992543 | biostudies-literature
GenomicsPolycomb preferentially targets stalled promoters of coding and non-coding transcripts
The Polycomb group (PcG) and Trithorax group (TrxG) of proteins are required for stable and heritable maintenance of repressed and active gene expression states. Their antagonistic function on gene control, repression for PcG and activity for TrxG, is mediated by binding to chromatin and subsequent ...
ORGANISM(S): Drosophila melanogaster 
2010-12-21 | E-GEOD-24521 | biostudies-arrayexpress
ProteomicsImproved Identification and Analysis of Small Open Reading Frame Encoded Polypeptides
Computational, genomic, and proteomic approaches have been used to discover nonannotated proteincoding small open reading frames (smORFs). Some novel smORFs have crucial biological roles in cells and organisms, which motivates the search for additional smORFs. Proteomic smORF discovery methods are a...
ORGANISM(S): Homo sapiens (Human) 
2017-10-17 | PXD005643 | Pride
Smorf-encoded polypeptides (seps) Lc-ms 
UnknownImproved Identification and Analysis of Small Open Reading Frame Encoded Polypeptides.
Not available
S-EPMC4939623 | biostudies-literature
UnknownDiscovery of a Vertebrate-Specific Factor that Processes Flagellar Glycolytic Enolase during Motile Ciliogenesis.
Not available
S-EPMC7132099 | biostudies-literature
ProteomicsImpact of SliP4 deletion on the high-light acclimation in Synechocystis sp. PCC 6803
SliP4 is a 37 amino acids small protein that is strongly induced when the cyanobacterium Synechocystis is exposed to high-light conditions. Deletion mutants exhibit a light-sensitive phenotype due to impaired cyclic electron flow and state transitions. Here, we investigated the consequences of SliP4...
ORGANISM(S): Synechocystis sp. PCC 6803 
2026-02-09 | PXD065318 | Pride
Metabolome High light Photosynthesis Gene expression Proteome 
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