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ProteomicsMetaproteomic analysis to assess the impact of storage media on human gut microbiome in fecal samples
We performed a mass spectrometry-based metaproteomic study to assess the impact of storage media on human gut microbiome in fecal samples. We evaluated FDA-authorized OMNIgene·GUT (OG), phosphate-buffered saline (PBS), and RNALater (RNAL) buffers.
ORGANISM(S): Homo sapiens (Human) 
2025-10-13 | PXD060337 | Pride
Metaproteomics  bottom-up proteomics  mass spectrometry  bioinformatics  human gut microbiome  fecal sample  storage media 
TranscriptomicsTranscription profiling of human cells stored at ambient temperature in different storage media
This series represents the complete series of the human 293h media depleted storage on agarose / rehydration condition course analysis. Samples include Control, monolayer; Control, monolayer/full recovery, antibiotics; Spheroid, no storage; two week storage/0hr recovery; two week storage/full recove...
ORGANISM(S): Homo sapiens 
2008-06-11 | E-GEOD-1364 | biostudies-arrayexpress
ProteomicsIn-depth proteome analysis of Hela cell culture conditioned media containing fetal bovine serum.
We performed DIA-MS based proteomic analysis of Hela cells conditioned media containing fetal bovine serum by albumin (Alb)-depletion and non-depletion. In addition, we attempted to enrich secreted proteins by reducing the volume of culture medium (10mL, 5mL and 2mL). The supernatants of each cultur...
ORGANISM(S): Homo Sapiens (human) 
2022-02-22 | PXD024272 | JPOST Repository
Genomicscomposite DNA storage
DNA storage of digital media using composite DNA
PRJEB32427 | ENA
TranscriptomicsModulation of the cancer cell transcriptome by culture media formulations and cell density
We investigated how varying the composition of cell culture formulations and growing cancer cells at different densities might affect tumor cells genotype. Specifically, we compared gene expression profiles generated by human MDA-MB-231 human breast cancer cells cultured in different media (MEM, DM...
ORGANISM(S): Homo sapiens 
2015-06-17 | E-GEOD-61670 | biostudies-arrayexpress
TranscriptomicsIdentification of plant vacuolar transporters mediating phosphate storage
Plant vacuoles serve as the primary intracellular compartments for inorganic phosphate (Pi) storage. Passage of Pi across vacuolar membranes plays a critical role in buffering the cytoplasmic Pi level against fluctuations of external Pi and metabolic activities. Here we demonstrate that the SPX-MFS ...
ORGANISM(S): Arabidopsis thaliana 
2016-03-28 | E-GEOD-74856 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human HEK 293 cells after storage at ambient temperature and rehydration
This series represents the rehydration series of the human 293h media depleted storage on agarose / rehydration condition course analysis. Samples include Control Monolayer, 0 hr desiccation, 0 hr rehydration, 6 hr rehydration, 24 hr rehydration, and 72 hr rehydration.
ORGANISM(S): Homo sapiens 
2008-06-11 | E-GEOD-1455 | biostudies-arrayexpress
TranscriptomicsLong-Term Storage of Human Cells at Ambient Temperature
This series represents the complete series of the human 293h media depleted storage on agarose / rehydration condition course analysis. Samples include Control, monolayer; Control, monolayer/full recovery, antibiotics; Spheroid, no storage; two week storage/0hr recovery; two week storage/full recove...
ORGANISM(S): Homo sapiens 
2005-08-01 | GSE1364 | GEO
GenomicsStorage media and not extraction method has the biggest impact on recovery of bacteria from the oral microbiome
Storage media and not extraction method has the biggest impact on recovery of bacteria from the oral microbiome
PRJEB34486 | ENA
ProteomicsPreservation methods and PBS washing affect the AML proteome
In the current study, we have studied the effect of three storage and preparation protocols on two AML-derived cell lines: 1) cryopreservation of viable cells for storage in liquid nitrogen, 2) cell pellet storage in liquid nitrogen and 3) freshly SDS lysed cell lysate stored at -°80. We further stu...
ORGANISM(S): Homo sapiens (Human) 
2018-01-19 | PXD008361 | Pride
Aml Dmso Pbs Storage conditions 
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