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ProteomicsS-palmitoylation during retinoic acid induced neuronal differentiation of SH-SY5Y neuroblastoma cells
S-palmitoylation is the covalent attachment of palmitic acid to cysteine residues through a thioester bond. S-palmitoylation is highly abundant in neurons, where it plays a fundamental role in neuronal development. In addition, S-palmitoylation is associated with many neurodegenerative diseases, inc...
ORGANISM(S): Homo sapiens (Human) 
2023-10-24 | PXD040613 | Pride
Acyl-biotin exchange Lipid metabolic labelling Protein s-palmitoylation Sh-sy5y differentiation Retinoic acid Mass spectrometry-based proteomics 
ProteomicsPopulus Palmitoylome - Proteomic Analysis of a Poplar Cell Suspension Culture Suggests a Major Role of Protein S-Acylation in Diverse Cellular Processes
The aim of this work was to identify S-acylated proteins in poplar. In order to achieve this, we have combined the acyl-biotin exchange method with a mass spectrometry based proteomic approach. To date, this is the only study on S-acylated proteins in a tree species. In total, we identified around 4...
ORGANISM(S): Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) 
2016-05-09 | PXD003735 | Pride
Mass spectrometry S-acylation Populus Spectral counting 
ProteomicsNpr2-mediated cGMP signalling modulates S-palmitoylation and controls growth cone morphology of DRG neurons
A cGMP signalling cascade composed of the ligand C-type natriuretic peptide (CNP), the natriuretic peptide receptor 2 (Npr2) and the cGMP-dependent kinase Iα (cGKI) is implicated by growth cone splitting in the bifurcation of afferents from dorsal root ganglia (DRG), cranial sensory ganglia (CSG) an...
ORGANISM(S): Mus musculus (Mouse) 
2018-10-18 | PXD010326 | Pride
Ap-ms Cgmp signalling Shotgun 
ProteomicsLong-chain S-acylation is a key modulator during the macrophage inflammatory response
Long-chain S-acylation is a reversible lipid modification critical for regulating protein localization, stability, and signaling, yet its role in macrophage-mediated inflammation remains incompletely understood. Here, we combine stable isotope labeling by amino acids in cell culture (SILAC) with sit...
ORGANISM(S): Homo sapiens (Human) 
2026-06-10 | PXD066221 | Pride
ProteomicsPalmitoylated proteins in bovine granulosa cells
The palmitoyl-proteome of bovine granulosa cells (GC) cells was investigated by combining acyl-biotin exchange chemistry and quantitative mass spectrometry analysis.
ORGANISM(S): Bos taurus (Bovine) 
2022-02-15 | PXD020547 | Pride
Bovine Palmitoylation Granulosa cells 
ProteomicsPalmitoylated proteins in bovine ovarian cumulus-oocyte complexes
The palmitoyl-proteome of bovine cumulus-oocyte complexes (COCs) cells was investigated by combining acyl-biotin exchange chemistry and quantitative mass spectrometry analysis.
ORGANISM(S): Bos taurus (Bovine) 
2022-02-15 | PXD020540 | Pride
Bovine Palmitoylation Cumulus-oocyte complexes 
Proteomicsn-Dodecyl-β-D-maltopyranoside (DDM)-Assisted Resolubilization Enhances S-Palmitoylation Proteomics
This study demonstrates that adding the non-ionic surfactant n-dodecyl-β-D-maltopyranoside (DDM) during protein resolubilization improves the identification of hydrophobic peptides and proteins in bottom-up proteomics. DDM's effectiveness in overcoming the challenge of losing hydrophobic proteins af...
ORGANISM(S): Homo sapiens (Human) 
2025-12-16 | PXD068353 | Pride
Macrophages Protein resolubilization Immunoproteomics N-dodecyl-β-d-maltopyranoside (ddm) Hydrophobic proteome S-palmitoylation 
ProteomicsPlasmodium falciparum palmitome
Acyl biotin exchange SILAC biological replicate 1, technical replicate 1
ORGANISM(S): Plasmodium falciparum 
2012-09-24 | PRD000459 | Pride
Proteomicsn-Dodecyl-β-D-maltopyranoside (DDM)-Assisted Resolubilization Enhances Hydrophobic Peptide and Protein Identification in Bottom-Up Proteomics
This study demonstrates that adding the non-ionic surfactant n-dodecyl-β-D-maltopyranoside (DDM) during protein resolubilization improves the identification of hydrophobic peptides and proteins in bottom-up proteomics. DDM's effectiveness in overcoming the challenge of losing hydrophobic proteins af...
ORGANISM(S): Mus musculus (Mouse) 
2025-12-16 | PXD064279 | Pride
Macrophages Protein resolubilization Immunoproteomics N-dodecyl-β-d-maltopyranoside (ddm) Hydrophobic proteome S-palmitoylation 
ProteomicsS-palmitoylation of synaptic proteins in rat synaptoneurosomes
Temporal and target-specific S-palmitoylation of synaptic proteins supports synapse and neural network plasticity: Synaptic plasticity is a phenomenon essential for learning and memory, which relies on activity-dependent changes in neural connectivity. S-palmitoylation, a reversible posttranslation...
ORGANISM(S): Rattus norvegicus (Rat) 
2025-10-20 | PXD058417 | Pride
Ltp stimulation Synaptoneurosomes Acyl-biotin exchange S-palmitoylation 
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