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TranscriptomicsTranscriptome of Aspergillus oryzae following ER stress
The Aspergillus oryzae, an important filamentous fungus used in food fermentation and enzyme industry, has been revealed to own prominent features in its genomic compositions by genome sequencing and various other tools. However, the functional complexity of the A. oryzae transcriptome has not yet b...
ORGANISM(S): Aspergillus oryzae 
2010-02-02 | E-GEOD-18851 | biostudies-arrayexpress
TranscriptomicsDifferential gene expression analysis of MAT1-1 and MAT1-2 strains in Aspergillus oryzae
The potential for sexual reproduction in Aspergillus oryzae was assessed by investigating the presence and functionality of MAT genes. Previous genome studies had identified a MAT1-1 gene in the RIB40 reference strain. We now report the existence of a complimentary MAT1-2 gene and sequencing of an i...
ORGANISM(S): Aspergillus oryzae 
2012-04-29 | E-GEOD-33542 | biostudies-arrayexpress
TranscriptomicsEffects of manR disruption and overexpression on Aspergillus oryzae gene expression
Fungal endo-M-NM-2-mannanases (M-NM-2-mannanases) are widely used as industrial enzymes; however, no transcriptional regulator of M-NM-2-mannanases has been identified in fungi or other eukaryotic cells to date. To identify a transcriptional regulator of M-NM-2-mannanases in Aspergillus oryzae, a ge...
ORGANISM(S): Aspergillus oryzae RIB40 
2012-11-08 | E-GEOD-40590 | biostudies-arrayexpress
MetabolomicsUnveiling molecular changes in guabiju during Aspergillus brasiliensis cultivation: insights from untargeted metabolomics

Black aspergilli exhibit remarkable bioconversion potential by transforming plant matrices into bioactive compounds, although their metabolic processes remain underexplored. This study investigated the biotransformation of metabolites during the solid-state cultivation of guabiju (Myrcianthes...

2025-08-08 | MTBLS12436 | MetaboLights
TranscriptomicsExpression data from batch cultivations with A. niger, A. oryzae and A. nidulans grown on glucose and glycerol
Conserved transcriptional regulation of glycerol metabolism was investigated in three Aspergillus species, A. nidulans, A. oryzae and A. niger. For this purpose, batch cultivations under well controlled conditions were performed with the three Aspergilli. Samples for RNA extraction were collected an...
ORGANISM(S): Aspergillus oryzae 
2010-06-21 | E-GEOD-15702 | biostudies-arrayexpress
TranscriptomicsA tri-species Aspergillus array (oryzae arrays)
The full genome sequencing of the filamentous fungi Aspergillus nidulans, Aspergillus niger and Aspergillus oryzae has opened the possibilities for studying the cellular physiology of these fungi on a systemic level. As a tool to explore this, we are presenting an Affymetrix GeneChip developed for tra...
ORGANISM(S): Aspergillus oryzae 
2008-02-15 | E-GEOD-9277 | biostudies-arrayexpress
TranscriptomicsA tri-species Aspergillus array
This SuperSeries is composed of the following subset Series: GSE9275: A tri-species Aspergillus array (nidulans arrays) GSE9276: A tri-species Aspergillus array (niger arrays) GSE9277: A tri-species Aspergillus array (oryzae arrays) Keywords: SuperSeries Refer to individual Series
ORGANISM(S): Aspergillus oryzae 
2008-02-10 | E-GEOD-9298 | biostudies-arrayexpress
TranscriptomicsA tri-species Aspergillus array (niger arrays)
The full genome sequencing of the filamentous fungi Aspergillus nidulans, Aspergillus niger and Aspergillus oryzae has opened the possibilities for studying the cellular physiology of these fungi on a systemic level. As a tool to explore this, we are presenting an Affymetrix GeneChip developed for tra...
ORGANISM(S): Aspergillus niger 
2008-02-15 | E-GEOD-9276 | biostudies-arrayexpress
TranscriptomicsExpression data from Aspergillus oryzae grown under hypoxic condition.
Hypoxia imposes stress on filamentous fungi that require oxygen to proliferate. Global transcription analysis of Aspergillus oryzae grown under hypoxic conditions found that the expression of about 50% of 4,244 affected genes was either induced or repressed more than 2-fold. A comparison of these ge...
ORGANISM(S): Aspergillus oryzae RIB40 
2011-07-30 | E-GEOD-31046 | biostudies-arrayexpress
ProteomicsMixed colonies of Aspergillus niger and Aspergillus oryzae cooperatively degrading wheat bran
A. niger and A. oryzae are two filamentous fungi widely used in industry to produce various enzymes (e.g. pectinases, amylases) and metabolites (e.g. citric acid). Using proteomics, the co-cultivation of these two fungi in wheat bran showed an equal distribution of the two strains forming mixed colo...
ORGANISM(S): Aspergillus niger Aspergillus oryzae var. oryzae 
2017-02-27 | PXD005532 | Pride
Fungus  aspergillus  protein production  mixed culture  xlnr 
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