Automated liquid handler

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Unknown (47)
Proteomics (32)
Transcriptomics (6)
Genomics (6)
Metabolomics (6)

Organisms

Homo sapiens (22)
Mus musculus (10)
Saccharomyces cerevisiae (3)
Heterocephalus glaber (2)
Severe acute respiratory syndrome coronavirus 2 (1)
Arabidopsis thaliana (1)
Chlorocebus sabaeus (1)
Felis catus (1)

Organisms

Homo sapiens (3)
Mus musculus (1)

Repository

pride (28)
biostudies-arrayexpress (8)
MetaboLights (6)
ENA (4)
MassIVE (3)
PanoramaPublic (1)

Tissue

Blood plasma (8)
Cell culture (5)
Brain (3)
Blood serum (2)
Spinal ganglion (2)
Blood platelet (1)
Cell suspension culture (1)
Cerebrospinal fluid (1)
Ewing's sarcoma cell (1)
Fibroblast (1)
JURKAT cell (1)
Kidney (1)
Lung (1)
Macrophage (1)
Root (1)
Shoot (1)
Stem cell (1)
Tear (1)
Urine (1)

Disease

B-cell adult acute lymphocytic leukemia (1)
Brain cancer (1)
Chronic kidney disease (1)
Colon cancer (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (28)
Shotgun proteomics (13)
Bottom-up proteomics (10)
Data-independent acquisition (7)
Data-dependent acquisition (5)
Mass spectrometry (4)
NMR spectroscopy (2)
SWATH MS (2)
Affinity purification coupled with mass spectrometry proteomics (1)
SRM/MRM (1)

Instrument Platform

Illumina HiSeq 4000 (3)
BD Influx sorter (2)
Agilent Bravo NGS workstation, Microlab STAR automated liquid handler (Hamilton Robotics), PCR machine (MJ Research Peltier Thermal Cycler) (2)
Illumina HiSeq 2000 (2)
Orbitrap Exploris 480 (2)
Direct infusion MS - positive (2)
Nuclear Magnetic Resonance (NMR) - (2)
Python (1)
Nugen Ovation SPIA; Wafergen’s Apollo liquid handler; KAPA Hyper Prep Library Kit (1)
QIAGEN TissueLyser II (1)
Isoflurane euthanasia chamber (1)
High-performance computing workstation (1)
Protocol computer workstation running R statistical software (1)
Thermal cycler (PCR); Covaris ME220 focused ultrasonicator; magnetic separation rack; Agilent TapeStation system (D5000 and D1000 ScreenTape assays); Qubit fluorometer or equivalent; microcentrifuge. (1)
JANUS® G3 MDT automated liquid handling workstation (PerkinElmer); thermal cycler or incubator (42 °C); Zymo DNA Clean & Concentrator columns; AMPure XP magnetic bead purification system; magnetic separation rack. (1)
Multichannel pipettes or automated liquid handler; 384-well tissue culture plates; Class II biological safety cabinet; CO₂ incubator (37 °C, 5% CO₂). (1)
BD Influx (1)
Illumina iSeq 100 (1)
Illumina NovaSeq 6000 (1)
NextSeq 500 (1)
Orbitrap Astral (1)
Orbitrap Fusion Lumos (1)
TimsTOF Pro 2 (1)
Direct infusion MS - (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2026 (9)
2025 (7)
2020 (6)
2023 (6)
2024 (5)
2021 (4)
2022 (3)
2018 (2)
2016 (1)
2019 (1)
2017 (1)
2015 (1)

CHEBI ID

CHEBI:15741 (4)
CHEBI:16449 (3)
CHEBI:132034 (2)
CHEBI:15347 (2)
CHEBI:15354 (2)
CHEBI:15366 (2)
CHEBI:1547 (2)
CHEBI:15611 (2)
CHEBI:15760 (2)
CHEBI:15891 (2)
CHEBI:15964 (2)
CHEBI:16236 (2)
CHEBI:16335 (2)
CHEBI:16344 (2)
CHEBI:167005 (2)
CHEBI:16709 (2)
CHEBI:16750 (2)
CHEBI:16919 (2)
CHEBI:17189 (2)
CHEBI:17376 (2)
CHEBI:17405 (2)
CHEBI:17521 (2)
CHEBI:17558 (2)
CHEBI:17992 (2)
CHEBI:18243 (2)
CHEBI:24266 (2)
CHEBI:27732 (2)
CHEBI:27823 (2)
CHEBI:28790 (2)
CHEBI:30751 (2)

Metabolite Name

2-oxoisocaproic acid (2)
Acetone (2)
Alanine (2)
Butyric acid (2)
Creatine (2)
Ethanol (2)
Formic acid (2)
Gentisic acid (2)
Lactic acid (2)
PIPES (2)
Propionic acid (2)
Pyruvic acid (2)
Quercitrin (2)
Succinic acid (2)
Taurine (2)
(+-)-Baclofen (1)
(-)-Epicatechin (1)
(25R)-3beta,4beta-dihydroxycholest-5-en-26-oate(1-) (1)
(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoate (1)
(9Z)-heptadecenoate (1)
(S)-Succinyldihydrolipoamide (1)
(Z)-22-Hentriacontene-2,4-dione (1)
(Z)-[3-(Methylsulfinyl)1-propenyl]2-propenyl disulfide (1)
1,2-Epoxy-1,2,7,7',8,8',11,12-octahydro-psi,psi-carotene (1)
1,20-Eicosanediol (1)
1,3,7-Trimethyluric acid (1)
1,3-Dimethyluric acid (1)
1,7-Dimethyluric acid (1)
1-(3-Chlorophenyl)piperazine (1)
1-(beta-D-Glucopyranosyloxy)3-octanone (1)

First Public Date

2026 (1)
2023 (1)
2022 (1)
2021 (1)

Study type

RNA-seq of coding RNA from single cells (3)
Exome sequencing (1)
ChIP-seq (1)
DNA-seq (1)
RNA-seq of total RNA (1)
RNA-seq of coding RNA (1)

Release Date

2025 (13)
2020 (10)
2024 (6)
2023 (5)
2022 (4)
2021 (4)
2026 (3)
2019 (3)
2016 (1)
2018 (1)
2017 (1)
2015 (1)
2013 (1)
2006 (1)
2005 (1)

Lab affiliation

LBPC-PPC, Montpellier University, IRMB CHU Montpellier, INM INSERM, Montpellier, Occitanie, France (2)
Molecular Neuropharmacology and Genetics Laboratory, Department of Neuroscience, Faculty of Health and Medical Sciences, University of Copenhagen, 2200, Denmark (2)
Proteomics Team, Nestlé Institute of Health Sciences, Lausanne, Switzerland (2)
Calico Labs, United States (1)
Calico Life Sciences (1)
Cancer proteomics lab Department of Molecular Cell Biology Weizmann Institute of Science (1)
Cell Biology Harvard Medical School USA (1)
Charite- Universitaetsmedizin Berlin, 10117 Berlin, Germany (1)
Charité Universitätsmedizin Berlin, Department of Biochemistry, Berlin, Germany (1)
Department of Biochemistry and Molecular Biology, Michael Smith Laboratories, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada (1)
Department of Biological Sciences, Department of Chemistry, Vanderbilt University. Department of Pathology, Microbiology and Immunology, Vandberbilt University Medical Center (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905, USA (1)
Department of Molecular Medicine, Cornell University, Ithaca, NY 14853 Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853 (1)
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany (1)
Department of Women and Children’s Health, Science for Life Laboratory, Karolinska Institutet, Stockholm, Sweden (1)
Discovery Proteomics Facility University of Oxford Target Discovery Institute, NDMRB Oxford, OX3 7FZ (1)
Institute for Genetics, Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), Cologne, Germany (1)
Laboratory of Experimental Cancer Research, Department of Human Structure and Repair, Ghent University, Ghent, Belgium (1)
Molecular Biomarkers Core, Nestlé Institute of Health Sciences, Lausanne, Switzerland (1)
Molecular Cell Biology, Weizmann Institute of Science (1)
Nestlé Research – Nestlé Institute of Food Safety & Analytical Sciences (1)
Professor Biochemistry and Molecular Biology Director, Life Sciences Institute (1)
Proteomics, Nestlé Institute of Health Sciences, Lausanne, Switzerland (1)
University of Washington (1)
Vanderbilt University Department of Chemistry (1)

Tags

xref:PubMed:35770252 (1)
xref:PubMed:34581788 (1)

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High-Precision Automated Workflow for Urinary Untargeted Metabolomic Epidemiology

Urine is a non-invasive biofluid that is rich in polar metabolites and well-suited for metabolomic epidemiology. However, due to individual variability in health and hydration status, the physiological concentration of urine can differ >15-fold, which can pose major challenges in untargeted LC-MS me...

2021-06-10 | MTBLS2295 | MetaboLights

Principles of computer-controlled linear motion applied to an open-source affordable liquid handler for automated micropipetting.

Not available

S-EPMC7424513 | biostudies-literature

Improved efficiency of two-step amplicon PCR using an acoustic liquid handler.

Not available

S-EPMC12283028 | biostudies-literature

Quantitative amino acid analysis by liquid chromatography-tandem mass spectrometry using low cost derivatization and an automated liquid handler.

Not available

S-EPMC7012744 | biostudies-literature

Comparison of performances of automatic versus manual liquid handling in density-based separation of extracellular vesicles from plasma and urine

Extracellular vesicles (EV) in body fluids are extensively studied as potential biomarkers for numerous diseases. Major impediments of EV-based biomarker discovery include the manual labor, and the specificity and reproducibility of EV sample preparation. To tackle this, we present an automated liqu...

ORGANISM(S): Homo sapiens (Human)

2023-05-10 | PXD032394 | Pride

Development of Automated Proteomic Workflows Utilizing Silicon-Based Coupling Agents

This work highlights an automated method for enzyme immobilization via 4-triethoxysilylbutyraldehyde (TESB) and 11-triethoxysilylundecanal (TESU) derived silicone-based coupling agents. From the various coupling strategies we scrutinized, TESB and 4-triethoxysilylbutanoic acid (TESBA), the carboxyli...

ORGANISM(S): Homo sapiens (Human)

2024-06-10 | PXD051564 | Pride

Capillary electrophoresis Immobilized enzyme particle Peptide mapping Immobilized enzyme microreactor Automated liquid handler Liquid-chromatography mass spectrometry Bottom-up proteomics

Technical upgrade of an open-source liquid handler to support bacterial colony screening.

Not available

S-EPMC10315574 | biostudies-literature

Extraction-free clinical detection of SARS-CoV-2 virus from saline gargle samples using Hamilton STARlet liquid handler.

Not available

S-EPMC10013237 | biostudies-literature

Automated MagNet Enrichment Unlocks Deep and Cost-Effective LC-MS Plasma Proteomics

Plasma is an ideal material for proteomics due to its diverse protein content reflecting physiological and pathological states, and its compatibility with minimally invasive sampling. Deep proteomic profiling of plasma is limited by high-abundant proteins that mask the detection of low-abundant prot...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2025-05-05 | MSV000097796 | MassIVE

Development of an Adaptive, Economical, and Easy-to-Use SP3-TMT Automated Sample Preparation Workflow for Quantitative Proteomics

Liquid handling robots have been developed to automate various steps of the bottom-up proteomics workflow, however, protocols for the generation of isobarically labeled peptides remain limited. Existing methods often require costly specialty devices and are constrained by fixed workflows. To address...

ORGANISM(S): Homo sapiens (Human)

2025-06-16 | PXD060786 | Pride

Automation Sample preperation Unfolded protein response and tandem mass tags

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97 Results

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