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ProteomicsPlasmodium falciparum bromo-domain containing epigenetic protein complexes recruited to modified histone tails as identified by histone peptide pulldown (HPP)-MS/MS and further characterized by GFP-IP-MS/MS and HA-IP-MS/MS
In order to identify epigenetic protein complexes recruited to histone PTMs in the deadly human malaria parasite Plasmodium falciparum, we set out to perform histone peptide pulldowns with various histone peptides. Biotinylated peptides corresponding to P. falciparum histone variant H2A.Z, H2B.Z and...
ORGANISM(S): Plasmodium falciparum 
2019-10-15 | PXD010644 | Pride
Epigenetic complex Bromo-domain protein Hpp Gcn5 Gfp-ip Histone peptide pulldown Interactor Plasmodium falciparum Taf1 Histone acetylation Ha-ip Reader complex Histone methylation 
TranscriptomicsAB family 1
Array comparative genomic hybridization was used to identify genomic differences between male and female zebrafish. No universal sex-linked CNVR was identified. AB strain of zebrafish were used.The family consist of the parents and 2 male and female offspring each (total 6 samples). Dad's gDNA was u...
ORGANISM(S): Danio rerio 
2012-04-16 | E-GEOD-34334 | biostudies-arrayexpress
TranscriptomicsAB family 2
Array comparative genomic hybridization was used to identify genomic differences between male and female zebrafish. No universal sex-linked CNVR was identified. AB strain of zebrafish were used.The family consist of the parents and 2 male and female offspring each (total 6 samples). Dad's gDNA was u...
ORGANISM(S): Danio rerio 
2012-04-16 | E-GEOD-34335 | biostudies-arrayexpress
TranscriptomicsToh family 1
Array comparative genomic hybridization was used to identify genomic differences between male and female zebrafish. No universal sex-linked CNVR was identified. AB strain of zebrafish were used.The family consist of the parents and 2 male and female offspring each (total 6 samples). Dad's gDNA was u...
ORGANISM(S): Danio rerio 
2012-04-16 | E-GEOD-34336 | biostudies-arrayexpress
TranscriptomicsToh family 2
Array comparative genomic hybridization was used to identify genomic differences between male and female zebrafish. No universal sex-linked CNVR was identified. AB strain of zebrafish were used.The family consist of the parents and 2 male and female offspring each (total 6 samples). Dad's gDNA was u...
ORGANISM(S): Danio rerio 
2012-04-16 | E-GEOD-34337 | biostudies-arrayexpress
TranscriptomicsTranscription profile of the Plasmodium falciparum intraerythrocytic cycle
This experiment characterizes the transcriptome of the human malaria parasite, P. falciparum at 8 different stages of the intraerythrocytic cycle Examination of polyA selected RNA in Plasmodium falciparum 3D7 strain at 8 different stages using RNA-seq
ORGANISM(S): Plasmodium falciparum 3D7 
2010-10-28 | E-GEOD-23865 | biostudies-arrayexpress
TranscriptomicsArray comparative genomic hybridization to identify genomic differences between male and female zebrafish.
This SuperSeries is composed of the following subset Series: GSE34334: AB family 1 GSE34335: AB family 2 GSE34336: Toh family 1 GSE34337: Toh family 2 Refer to individual Series
ORGANISM(S): Danio rerio 
2012-04-16 | E-GEOD-34338 | biostudies-arrayexpress
UnknownA genome-wide chromatin-associated nuclear peroxiredoxin from the malaria parasite Plasmodium falciparum.
Not available
S-EPMC3064226 | biostudies-literature
GenomicsThe Plasmodium falciparum histone methyltransferase PfSET10 is dispensable for the regulation of antigenic variation and gene expression in blood stage parasites
The Plasmodium falciparum histone methyltransferase PfSET10 is dispensable for the regulation of antigenic variation and gene expression in blood stage parasites
PRJNA1127598 | ENA
TranscriptomicsP. falciparum Heterochromatin Protein 1 Marks Genomic Loci Linked to Phenotypic Variation of Exported Virulence Factors
Epigenetic processes are the main conductors of phenotypic variation in eukaryotes. The malaria parasite Plasmodium falciparum employs antigenic variation of the major surface antigen PfEMP1, encoded by 60 var genes, to evade acquired immune responses. PfEMP1 also mediates sequestration of infected ...
ORGANISM(S): Plasmodium falciparum 
2010-05-06 | E-GEOD-17029 | biostudies-arrayexpress
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