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MetabolomicsEFFECT OF DIFFERENT POOLED QC SAMPLES ON DATA QUALITY DURING AN INTER-BATCH EXPERIMENT IN UNTARGETED UHPLC-HRMS ANALYSIS ON TWO DIFFERENT MS PLATFORMS
Quality control (QC) samples are commonly used in metabolomics approaches for three main reasons: (i) the initial conditioning of the column; (ii) the correction of analytical drift especially between batches; and (iii) the evaluation of measurement precision. In practice there are several ways to p...
2026-02-04 | MTBLS10568 | MetaboLights
MetabolomicsAddressing batch effects in large-scale metabolomics with augmented experimental design and meta-analysis (Part 1)
Not available
ORGANISM(S): Caenorhabditis elegans 
ST002095 | MetabolomicsWorkbench
MetabolomicsAddressing batch effects in large-scale metabolomics with augmented experimental design and meta-analysis (Part 2)
Not available
ORGANISM(S): Caenorhabditis elegans 
ST002096 | MetabolomicsWorkbench
MetabolomicsAddressing batch effects in large-scale metabolomics with augmented experimental design and meta-analysis
Not available
ORGANISM(S): Caenorhabditis elegans 
ST002092 | MetabolomicsWorkbench
ProteomicsDDA-PASEF and diaPASEF acquired HCC1806/HS578T proteomic datasets with deliberate batch effects
We generated two comprehensive large-scale proteomics datasets with deliberate batch effects using the latest parallel accumulation-serial fragmentation in both Data-Dependent and Data-Indepentdent Acquisition modes. This dataset contain a balanced two-class design (cell lines: HCC1806 vs HS578T), a...
ORGANISM(S): Homo sapiens (Human) 
2023-11-21 | PXD041391 | Pride
Dda Pasef Dia Hcc1806 Hs578t Batch effects 
ProteomicsDDA-PASEF and diaPASEF acquired A549/K562 proteomic datasets with deliberate batch effects
We generated two comprehensive large-scale proteomics datasets with deliberate batch effects using the latest parallel accumulation-serial fragmentation in both Data-Dependent and Data-Indepentdent Acquisition modes. This dataset contain a balanced two-class design (cell lines: A549 vs K562), allowi...
ORGANISM(S): Homo sapiens (Human) 
2023-11-21 | PXD041421 | Pride
Dda Pasef Dia K562 A549 Batch effects 
MetabolomicsMetabolomics analysis of the toxic effects of the production of lycopene and its precursors
Using cells as microbial factories enables highly specific production of chemicals with many advantages over chemical syntheses. A number of exciting new applications of this approach are in the area of precision metabolic engineering, which focuses on improving the specificity of target production....
2021-02-11 | MTBLS642 | MetaboLights
ProteomicsReprocessed dataset with Skyline Batch: SWATH Analysis of Yeast Proteome over Time in Response to Osmotic Stress
SWATH analysis of Yeast Proteome over time in response to Osmotic Stress. We sampled cell cultures in biological triplicates at six time points following the application of osmotic stress and acquired single injection DIA datasets on a high-resolution 5600 tripleTOF instrument operated in SWATH mode...
ORGANISM(S): Saccharomyces Cerevisiae 
2021-11-12 | PXD029665 | panorama
MetabolomicsEffects of dietary Hermetia illucens oil on rumen and serum metabolome profiles in lactating dairy cows

The metabolomics study was designed to investigate the effects of feeding cows with Hermetia illucens larvae oil on serum profiles.

2026-03-24 | MTBLS14113 | MetaboLights
MetabolomicsMetabolomics approach to understand the resource partitioning in Chlorella during growth
We use untargeted high-resolution mass spectrometry to understand the metabolic differences at exponential and stationary growth stages using 22 Chlorella strains collected from South East Asia. Using this data, we demonstrate the use of a filtering procedure based on the SVD on the untargeted metab...
2016-10-03 | MTBLS193 | MetaboLights
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