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GenomicsGenome wide profiling of RNA polymerase III in Saccharomyces cerevisiae
Genome wide mapping of RNA polymearase III binding sites in Saccharomyces cerevisiae under normal growth and nutrient starved condition using ChIP-seq. Chromatin Immuno-precipitation (ChIP) was performed for FLAG tagged version of pol III subunit RPC128 after crosslinking the log-phase cells with fo...
ORGANISM(S): Saccharomyces cerevisiae 
2013-06-21 | E-GEOD-39566 | biostudies-arrayexpress
ProteomicsProteomic profile of rat brain
Not available
ORGANISM(S): Rattus norvegicus (Rat) 
2013-06-18 | PRD000079 | Pride
UnknownPersonalising therapy for early-stage oestrogen receptor-positive breast cancer in older women.
Not available
S-EPMC8765742 | biostudies-literature
ProteomicsProteomic profiles in Acute Respiratory Distress Syndrome differentiates
Bronchoalveolar Lavage Fluid protein profile was characterized in ARDS subjects. Patients were divided into three groups: 1) Early phase survivors 2) Early phase non-survivors and 3) Late phase survivors. Bronchoalveolar lavage fluid was pooled within each group for sample preparation and mass spect...
ORGANISM(S): Homo sapiens (Human) 
2016-07-07 | PXD001095 | Pride
Bal Bioinformatics Proteomics Prognosis Ards Biomarkers 
TranscriptomicsNucleosome mapping in Saccharomyces cerevisiae in different conditions
This experiment aims to map nucleosome positions and comparison of the same in WT NORMAL GROWTH vs WT-NUTRIENT STARVATION/isw1∆2∆ MUTANT/rsc4-∆4 MUTANT in Saccharomyces cerevisiae using a custom designed tiling array on Agilent plat form. The corresponding platform is submitted to GEO under Geo-ID...
ORGANISM(S): Saccharomyces cerevisiae 
2013-06-21 | E-GEOD-39802 | biostudies-arrayexpress
TranscriptomicsQuantitative Mammalian Transcriptomics using Designed Primer-based Amplification
We describe a novel quantitative cDNA expression profiling strategy, involving amplification of the majority of mouse transcriptome using a defined set of 44 heptamer primers. The amplification protocol allows for efficient amplification from as low as 50pg of mRNA and did not alter the expression o...
ORGANISM(S): Mus musculus 
2013-04-29 | E-GEOD-45474 | biostudies-arrayexpress
TranscriptomicsTechnical Variations in Low-Input RNA-seq Methodologies
Transcriptomics data obtained from limiting amounts of mRNA is often noisy, providing primarily qualitative changes in transcript expressions. So far, technical variations arising out of the library preparation protocols have not been adequately characterized at reduced levels of mRNA. Here, we gene...
ORGANISM(S): Mus musculus 
2014-01-13 | E-GEOD-50856 | biostudies-arrayexpress
UnknownProspective study of bevacizumab plus temozolomide in patients with advanced neuroendocrine tumors.
Not available
S-EPMC4874232 | biostudies-literature
TranscriptomicsActivation of natural killer T cells promotes M2 macrophage polarization in adipose tissue and improves systemic glucose tolerance via the IL-4/STAT6 signaling axis in obesity
Natural killer T (NKT) cells are important therapeutic targets in various disease models and under clinical trials for cancer patients. However, their function in obesity and type 2 diabetes remains unclear. Our data show that adipose tissues of both mice and humans contain a population of type-1 NK...
ORGANISM(S): Mus musculus 
2012-04-12 | E-GEOD-36032 | biostudies-arrayexpress
ProteomicsPrediction of Mortality In Acute Respiratory Distress Syndrome
Acute Respiratory Distress Syndrome (ARDS) continues to have a high mortality. The objective of this study is to understand the differences in disease biology between survivors and non-survivors by characterizing BALF protein expression profiles in individual ARDS subjects.
ORGANISM(S): Homo sapiens (Human) 
2018-10-24 | PXD002672 | Pride
Bal Galaxyp Itraq Ards Biomarkers 2dlc-ms/ms 
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