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MetabolomicsMetabolic characterization of the natural progression of chronic hepatitis B (Biogenic amine and Acyl-carnitine assays)
Background: Worldwide, over 350 million people are chronically infected with the hepatitis B virus (HBV) and are at increased risk of developing progressive liver diseases. The confinement of HBV replication to the liver, which also acts as the central hub for metabolic and nutritional regulation, e...
2016-06-06 | MTBLS280 | MetaboLights
ProteomicsShotgun Proteomics Analysis, Functional Networks and Peptide Biomarkers for Biogenic Amine-producing Bacteria
Biogenic amine-producing bacteria are responsible for the production of basic nitrogenous compounds, such as histamine, cadaverine, tyramine and putrescine, after foods spoil due to microorganisms. In the present work, we applied a shotgun proteomics approach to quickly and easily characterize 15 di...
ORGANISM(S): Proteus penneri Stenotrophomonas maltophilia Hafnia alvei Enterobacter sp. T3 Raoultella planticola Proteus vulgaris Klebsiella oxytoca Morganella morganii (Proteus morganii) Proteus mirabilis Enterobacter cloacae EcWSU1 
2023-07-20 | PXD039320 | Pride
Lc‒esi‒ms/ms Shotgun proteomics Mass spectrometry Biogenic amine-producing bacteria Food Bacterial detection and identification Seafood 
ProteomicsHigh-Intensity Comparative and Quantitative Proteomics of Histamine-Forming and Other Biogenic Amine-Producing Bacteria Present in Seafood
This article describes a shotgun quantitative proteomics strategy to evaluate and compare foodborne strains of bacteria that produce biogenic amines.
ORGANISM(S): Enterobacter sp. T3 Hafnia alvei Proteus vulgaris Providencia rettgeri Klebsiella oxytoca NBRC 105695 Proteus mirabilis BB2000 Klebsiella pneumoniae KP-1 Providencia stuartii 
2025-05-06 | PXD043997 | Pride
Biogenic amine Bacteria Shotgun quantitative proteomics Fish Bacterial detection Lc-ms/ms 
TranscriptomicsGene expression profile of C. elegans biogenic amine synthesis mutants
The goal of this study is to compare the RNA expression profile of wild-type C. elegans nematodes to mutants defective in the synthesis of the biogenic amine neurotransmitters dopamine, serotonin, tyramine, and octopamine in day 2 adults.
ORGANISM(S): Caenorhabditis elegans 
2020-06-22 | GSE145255 | GEO
GenomicsGene expression profile of C. elegans biogenic amine synthesis mutants
Gene expression profile of C. elegans biogenic amine synthesis mutants
PRJNA606527 | ENA
TranscriptomicsPolarized Canine Liver Organoid Monolayers Capture Features of Western Diet-Induced Hepatic Metabolic Remodeling Across Transcriptomic, Lipidomic, and Biogenic Amine Signatures
Liver responses to Western-diet (WD) exposure remain incompletely defined, partly because conventional rodent models and immortalized hepatic cell lines incompletely recapitulate species-specific features of liver biology. Here, we established polarized epithelial monolayers from canine liver organo...
ORGANISM(S): Canis lupus familiaris 
2026-10-08 | GSE349735 | GEO
UnknownScreening and identification of biogenic amine oxidase producing strains in Sanchuan Ham and their effect on biogenic amine accumulation.
Not available
S-EPMC9304501 | biostudies-literature
GenomicsPolarized Canine Liver Organoid Monolayers Capture Features of Western Diet-Induced Hepatic Metabolic Remodeling Across Transcriptomic, Lipidomic, and Biogenic Amine Signatures
Polarized Canine Liver Organoid Monolayers Capture Features of Western Diet-Induced Hepatic Metabolic Remodeling Across Transcriptomic, Lipidomic, and Biogenic Amine Signatures
PRJNA1539906 | ENA
UnknownBiogenic amine neurotransmitters promote eicosanoid production and protein homeostasis.
Not available
S-EPMC7926251 | biostudies-literature
TranscriptomicsImpact of Elevated Plasma 5-HT on Global Gene Expression of Murine Megakaryocytes
The goal of this project was to understand the functional consequences of plasma biogenic amine serotonin (5-HT) elevation in megakaryocytes by measuring gene expression Total RNA was extracted from the megakaryocytes of mice treated with either 5-HT or saline and global gene expression was measured...
ORGANISM(S): Mus musculus 
2014-04-04 | E-GEOD-37273 | biostudies-arrayexpress
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