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ProteomicsProteomic Characterization of Bradyrhizobium diazoefficiens bacteroids during soybean root nodules senescence
The form and physiology of Bradyrhizobium diazoefficiens after the decline of symbiotic nitrogen fixation has been characterized. Proteomic analyses showed that the post-symbiotic B. diazoefficiens undergo metabolic remodeling as well defined groups of proteins declined, increased or remained unchan...
ORGANISM(S): Bradyrhizobium japonicum USDA 110 
2019-11-12 | PXD011604 | Pride
Nitrogen fixation Bradyrhizobium diazoefficiens Soybean Senescence 
ProteomicsAn Integrated Systems Approach Unveils New Aspects of Microoxia-mediated Regulation in Bradyrhizobium diazoefficiens
Using an integrated systems approach, the expressed proteome of B. diazoefficiens strain 110scp4 was measured under i) normal, oxic growth, and ii) microoxic growth condtions. This included, as a first step, the sequencing and de novo assembly of the genome of this widely used rhizobial model strain...
ORGANISM(S): Bradyrhizobium diazoefficiens 
2019-05-30 | PXD012491 | Pride
Comparative genomics Microoxia Proteogenomics Shotgun proteomics Symbiosis B. diazoefficiens Genome sequencing Transcriptomics Rhizobia Fnr/crp proteins 
GenomicsBradyrhizobium diazoefficiens strain:K01E
Bradyrhizobium diazoefficiens K01E Genome sequencing and assembly
PRJNA962154 | ENA
GenomicsBradyrhizobium diazoefficiens strain:S14C
Bradyrhizobium diazoefficiens S14C Genome sequencing and assembly
PRJNA962159 | ENA
GenomicsBradyrhizobium diazoefficiens strain:K09F
Bradyrhizobium diazoefficiens K09F Genome sequencing and assembly
PRJNA962155 | ENA
GenomicsBradyrhizobium diazoefficiens strain:S13E
Bradyrhizobium diazoefficiens S13E Genome sequencing and assembly
PRJNA962157 | ENA
GenomicsBradyrhizobium diazoefficiens strain:N03B
Bradyrhizobium diazoefficiens N03B Genome sequencing and assembly
PRJNA962156 | ENA
ProteomicsPleiotropic effects of PhaR regulator in Bradyrhizobium diazoefficiens microaerobic metabolism
Bradyrhizobium diazoefficiens can live inside soybean root nodules and in free-living conditions. In both states, when oxygen levels decrease, cells adjust their protein pools by gene transcription modulation. PhaR encodes a transcription factor annotated as PHA (polyhydroxyalkanoate) accumulation r...
ORGANISM(S): Bradyrhizobium japonicum USDA 110 Bacteria 
2024-05-22 | PXD047760 | Pride
Polyhydroxybutyrate Proteomics Microoxia Protein-dna interaction Rhizobia Transcriptomics 
GenomicsBradyrhizobium diazoefficiens
Bradyrhizobium diazoefficiens Genome sequencing and assembly
PRJNA376228 | ENA
GenomicsBradyrhizobium diazoefficiens
Bradyrhizobium diazoefficiens Transcriptome or Gene expression
PRJNA945098 | ENA
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