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TranscriptomicsTranscription profiling of Trypanosoma bruceii DHH1 wild type from pLEW100 for 24 hours
Induction of the expression of the DHH1 wild type from pLEW100 for 24 hours (M-1 24 hours Tetracycline). Non-induced cells were used as control.
ORGANISM(S): Trypanosoma brucei 
2010-01-01 | E-MEXP-2025 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Trypanosoma brucei DHH1 DEAD:DQAD mutant from pLEW100 for 24 hours
Induction of the expression of the DHH1 DEAD:DQAD mutant from pLEW100 for 24 hours (thus, M-1 24 hours
Tetracycline). Uninduced cells were used as control.
ORGANISM(S): Trypanosoma brucei 
2010-01-01 | E-MEXP-2026 | biostudies-arrayexpress
ProteomicsMagoh, Y14, eIF4AIII interactomes by TurboID proximity labelling provide no evidence for a canonical EJC in (almost) intron-less trypanosomatids
In metazoans, mRNA quality is tightly monitored from transcription to translation. A key role lies with the exon junction complex (EJC) that is placed upstream of the exon-exon junction after splicing. The EJC inner core is composed of Magoh, Y14, eIF4AIII and BTZ and the outer core of proteins invo...
ORGANISM(S): Trypanosoma brucei 
2024-03-25 | PXD050946 | Pride
Mrna metabolism Mrna export control Exon junction complex Trypanosoma brucei 
UnknownCerebral oxygenation in wake and during sleep and its relationship to cognitive function in community-dwelling older adults without sleep disordered breathing.
Not available
S-EPMC3011955 | biostudies-literature
TranscriptomicsMIRNA Gene Evolution in Arabidopsis lyrata and Arabidopsis thaliana: Illumina sequencing
Deep sequencing of small RNA from three closely related brassicaceae A. thaliana, A. lyrata and Capsella rubella was done to systematically analyze the evolution of MIRNA genes and their targets. Small RNA were extracted from total RNA by size fractionation and converted to DNA amplicons by serial a...
ORGANISM(S): Arabidopsis lyrata 
2010-05-14 | E-GEOD-20660 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of procyclic Trypanosoma brucei cultured at 27oC or under heat shock stress conditions at 41oC
Procyclic trypanosomes (strain 427 lister) were grown in culture under standard conditions at 27ºC in SDM79 medium with 10% foetal bovine serume (Brun and Schnenberger, 1979), in a gazed incubator (5% CO2). Logarithmically growing procyclic cells (at about 5*10^6 cells/ml, at 27°C) were added to o...
ORGANISM(S): Trypanosoma brucei 
2008-09-10 | E-MEXP-1476 | biostudies-arrayexpress
UnknownTrypanosomes lack a canonical EJC but possess an UPF1 dependent NMD-like pathway.
Not available
S-EPMC11888146 | biostudies-literature
UnknownCorrelates of protective cellular immunity revealed by analysis of population-level immune escape pathways in HIV-1.
Not available
S-EPMC3503140 | biostudies-literature
ProteomicsComparative proteomic analysis between light and dark-adapted Euglena gracilis
We sequenced and assembled a detailed transcriptome and draft genome for E. gracilis Z1. To improve annotation and investigate gene expression in E. gracilis, where most transcripts are also trans-spliced, we conducted comparative proteomic and transcriptomic analysis between light and dark-adapted ...
ORGANISM(S): Euglena gracilis 
2019-01-14 | PXD009998 | Pride
Euglena gracilis Photosynthesis Plastid Light dark adaption 
UnknownViral and host mediators of non-suppressible HIV-1 viremia.
Not available
S-EPMC10719098 | biostudies-literature
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